Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq136 219 5e-52 >seq136 Length=1264375 Score = 219 bits (242), Expect = 5e-52 Identities = 900/1397 (64%), Gaps = 38/1397 (3%) Strand=Plus/Plus Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763 ||||| |||||| | || || ||||||||||| || || || || || |||| || Sbjct 716139 GTTCACCCACGCTTCTCCTACACTCTTCAACGCAGGAACCAACAGGCCACAGCTGTCTAG 716198 Query 111764 TTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823 || ||||| |||| | ||||| || || | |||||||| | ||| || | | Sbjct 716199 CTGCTTCCTGCTTGCCATGAAGGATGACAGCATTGAAGGCATTTATGACACGCTGAAGCA 716258 Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATG--TCAGA 111881 ||||||| ||||| || | |||||| || ||||| || || | || ||||| Sbjct 716259 TTGTGCCCTCATCTCCAAATCGGCTGGAGGAATCGGTGTGGCGGTCA--GCTGCATCAGA 716316 Query 111882 GCCAACAAGTCTCGTATTAGA-GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCT 111940 | ||| | | | | || ||||| || | || ||||| | | || ||||| Sbjct 716317 TC-AACGGGGAGCTACATCGCTGGCACAAACGGCAACTCTAATGGTCTGGTCCCCATGCT 716375 Query 111941 TCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCG-CAAG------G 111993 | || | ||| ||| ||||| ||||| |||| ||||| | |||| | Sbjct 716376 GAGAGTTTACAACAACACGGCGCGTTATGTCGACCA----GGGCGGCAACAAGAGACCGG 716431 Query 111994 GATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGC 112053 || | |||| | || || |||||||||||| || | | || ||||| ||| || Sbjct 716432 GAGCCTTCGCCATGTACCTGGAGCCATGGCACTTTGACGTGTTTGACTTCCTGGAGCTGA 716491 Query 112054 GTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTC 112113 ||| ||| | || ||| || | | ||||| || | || || ||||| | Sbjct 716492 AGAAGAACACGGGTAAGGATGAGCAAAGGGCCAGAGATCTTTTTTATGCACTGTGGATCC 716551 Query 112114 CAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAG 112170 | || | |||||||||||||| |||||| | | |||||||| | ||||| Sbjct 716552 CTGACTTGTTCATGAAGAGAGT---GGAGAGCAACCAAGACTGGTCTCTGATGTGTCCGA 716608 Query 112171 ACAAGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAG 112229 || || ||||| || ||| ||| | ||| ||||||||||| |||||||| || Sbjct 716609 ACGAGTGCCCCGGGCTGGACGAATGCTGGGGG-GAGGAGTTTGAGCAGCTCTACACCAAA 716667 Query 112230 TACGAGGAAGAAAGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTAT 112288 || ||| | || | ||| | |||| |||| ||| | |||||| | || || Sbjct 716668 TATGAGAAGGAGGGGAGGGTCAA-GCGAGTGGTGAAGGCTCAGCAGGTGTGGTATGCCAT 716726 Query 112289 TCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCA 112348 | | | || || || || || |||||||| || ||||| |||||||||||||| ||| Sbjct 716727 TATTGAATCCCAGACAGAAACGGGTACACCGTACATGCTGTACAAAGACGCCTGCAACAG 716786 Query 112349 AAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTT 112408 ||||| || || ||||| |||| ||||| | ||||||||| |||||||| | Sbjct 716787 GAAGAGCAACCAGCAGAATCTGGGCACCATCAAATGCAGCAACCTCTGCACAGAAATTGT 716846 Query 112409 GGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAA 112468 |||| || | | |||||| ||| |||||||| || || || ||||||||| || Sbjct 716847 TGAATACACCAGCCACGATGAGGTGGCGGTGTGTAATCTGGCCTCCATCGCTCTCAACAT 716906 Query 112469 GTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAAC 112528 ||| || || ||| ||| ||||| | | ||||||| | || || ||| Sbjct 716907 GTACGTCACCCCTGAG---CGGACCTTTGACTTTAAAAAACTGTCATATGTGACCAAAGT 716963 Query 112529 TGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCG 112588 || || ||||| |||| | || || | || | || || || | || Sbjct 716964 AATCGTCAAGAACCTGAACAAGATCATAGACATTAACTACTATCCAGTGGTTGAAGCCGA 717023 Query 112589 TAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATT 112648 | || || | | | ||||| ||||| || ||||||| || ||| | || |||| || Sbjct 717024 GAGGTCCAACAAGCGCCACCGGCCAATAGGAATCGGTGTTCAGGGTTTGGCTGATGCCTT 717083 Query 112649 CATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATT 112708 ||| || || ||| | ||||| | ||| || || |||| | || || Sbjct 717084 CATCCTGATGCGTCACCCCTTTGAAAGCCCCGAGGCTCAGCTGCTCAACATCCACATCTT 717143 Query 112709 TGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCC 112768 |||||| || || ||||||| || ||||| || | ||| |||| | | || || Sbjct 717144 TGAGACCATCTACTACGCCGCCCTGGAGGCAAGCTGCGAGCTGGCCGCCGAGCTCGGCCC 717203 Query 112769 ATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGTGG 112826 || || || | ||| || ||||| | ||| |||||| || || | || |||||| Sbjct 717204 CTACGAGACGTATGAAGGCTCTCCTG--TCAGCAAGGGCACCCTCCAGTACGACATGTGG 717261 Query 112827 GAAGGTGA-GACCAAGCTTCACTACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGA 112884 | || || | ||| | | ||||| ||| ||| || ||||| ||| || Sbjct 717262 G-AGAAGACGCCCACTGACCTGTGCGACT-GGAAGCTGCTGAAGGAGAAGATCGCCAAGC 717319 Query 112885 AGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 112944 | || | | ||||| || || |||| || ||||| |||||||||||||| || ||| Sbjct 717320 ACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCC 717379 Query 112945 TGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCG 113004 |||| || || || | |||| ||||||| | |||||||| | || |||| Sbjct 717380 TGGGCAACAACGAGTCTATTGAGGCCTACACAAGCAACATCTACACCCGCAGGGTCCTCT 717439 Query 113005 CGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCT 113064 | ||||||||| ||| ||||| ||||| | | ||||| | |||| || || | Sbjct 717440 CCGGAGAGTTTCAGATCGTCAATCCTCATCTGCTCAAGGACCTGACGGAGAGAGGACTGT 717499 Query 113065 GGTCCAAGGATATGAAG 113081 || | |||| |||||| Sbjct 717500 GGAACGAGGAGATGAAG 717516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739420436480