Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq302 111 2e-19 seq185 84.2 3e-11 >seq302 Length=16539 Score = 111 bits (122), Expect = 2e-19 Identities = 216/314 (69%), Gaps = 4/314 (1%) Strand=Plus/Minus Query 153732 GGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 153791 ||||| ||| ||||| ||| || || | || || || |||||||| || | ||| Sbjct 3906 GGTGATCTGGGTGTTGATGTTGTAGTTGGAACTACACAGAGATTTGGTATCCCATTAGGA 3847 Query 153792 TATGGAGGTCCTCATGCTGCAT-TCTTTGCAACAACAGACAAGTATAAGAGAAAGATACC 153850 |||||||| || || ||||| | | ||||| |||| ||| | ||||| ||||| |||| Sbjct 3846 TATGGAGGACCGCACGCTGCTTATTTTTGCTACAAAAGAAGAATATAA-AGAAACCTACC 3788 Query 153851 TGGCAGAA-TTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCAC 153909 ||| |||| || |||| | | ||||| || |||||||| || | ||| | || | Sbjct 3787 TGGTAGAATTTATAGGCCTTACTAAAGATATAGATGGTAATAATGCCTTAAGAATGGCCC 3728 Query 153910 TACAGACTAGAGAGCAGCATATCAGGAGAGA-CAAAGCAACCAGTAACATCTGCACAGCT 153968 | || || || ||||| || || | ||||| || ||||| ||||| || || ||| Sbjct 3727 TTCAAACCAGGGAGCAACACATAAAAAGAGATTAAGGCAACATCAAACATTTGTACTGCT 3668 Query 153969 CAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTA 154028 |||| || || ||| ||| | ||| | || | | |||||||| | | ||||| Sbjct 3667 CAGGTTCTTCTTGCTGTAATGGCAGGAATGTACGGGGTTTATCATGGCCCTCAAGGACTT 3608 Query 154029 CATGCTATAGCAAG 154042 || ||| ||||| Sbjct 3607 GATTTTATTGCAAG 3594 >seq185 Length=1057535 Score = 84.2 bits (92), Expect = 3e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 153912 CAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAG 153971 ||||| ||||||||||| ||| | ||||||||||||||||| ||||||||||| |||||| Sbjct 9290 CAGACCAGAGAGCAGCACATCCGCAGAGACAAAGCAACCAGCAACATCTGCACTGCTCAG 9231 Query 153972 G 153972 | Sbjct 9230 G 9230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210019778560