Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq302 174 2e-38 >seq302 Length=16539 Score = 174 bits (192), Expect = 2e-38 Identities = 344/505 (68%), Gaps = 3/505 (1%) Strand=Plus/Minus Query 159298 TCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCA 159357 ||| | ||||||||| | ||| | ||||| || ||||||||| | | | ||| ||| Sbjct 2994 TCACTTCAACCTAACTCTGGAGCTCAGGGAGAATATGCAGGATTAATGGTAATTAGAGCT 2935 Query 159358 TACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACAT 159417 || ||| ||| ||||| | | | ||||||||||| | || ||| || || || Sbjct 2934 TATCATGAAGCTAATGGAGAAGGTCACAGAAATGTATGCCTTATCCCATCTTCTGCTCAC 2875 Query 159418 GGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTG-TGA 159476 ||||| ||||| ||||| ||||| ||||| || ||| ||| || || ||| | | Sbjct 2874 GGAACAAATCCAGCATCTGCAGTTATGGCCGGAATG-AAGGTGATCGTAACAAAAGCTTC 2816 Query 159477 TGATGATGGCAACATAGACATCAAAGATC-TAGAGAAGAAAGCAATCATGAATACATTTG 159535 || | || || || || | |||| | ||||||| || || || | | ||| | | Sbjct 2815 AGAAAACGGAAATATTGATGTTGAAGACCTTAGAGAAAAAGGCTATAAAGCATAAAGATA 2756 Query 159536 AACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA 159595 | || || ||||| | || || || || |||||||| || |||||| | || | Sbjct 2755 ATTTGGCAGCCCTTATGGTAACCTACCCTTCAACACATGGGGTGTTTGAATCTTCTATTA 2696 Query 159596 GACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATC 159655 || | | | | ||| |||| || || || || ||||||||| | ||||| || ||| Sbjct 2695 GAGAAGTCACTCAAATTATTCACGATAACGGAGGCCAGGTATATATGGATGGCGCGAATA 2636 Query 159656 TAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAA 159715 | ||||| ||||| || | | || || || | ||| |||||||| || ||||| | Sbjct 2635 TGAATGCTCAGGTTGGCTTGACCAATCCTGGTAAAATTGGCGCAGATGTTTGCCATCTTA 2576 Query 159716 ACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775 || | ||||| || || |||||| || ||||| ||||| || || || || ||||| Sbjct 2575 ACCTTCATAAAACCTTTGCTATTCCTCACGGAGGCGGAGGACCAGGGGTTGGACCTATCT 2516 Query 159776 GTGTAGCAAAACATCTCACACCATT 159800 | |||||| |||| || | ||| || Sbjct 2515 GCGTAGCAGAACAACTTAAACCTTT 2491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048377354240