Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq166 147 5e-30 seq81 134 3e-26 >seq166 Length=972737 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || |||||||| || || || ||||| |||| || || | |||||||| Sbjct 969433 ACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCA 969374 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||||||||| |||||||||||||| || Sbjct 969373 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTCCTGG 969314 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| |||||| |||||||||||||| || || || ||||| | ||||| Sbjct 969313 ATTTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTG 969254 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 969253 CCAGTGAGGGTCTTCACGAAGATCTGCAT 969225 Score = 116 bits (128), Expect = 8e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || |||||||| || || || ||||| |||| || || | || ||||| Sbjct 969661 ACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCC 969602 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || |||||||| || |||||||| || || || Sbjct 969601 AGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGG 969542 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||| |||||||||||||| ||| || || || || | ||||| Sbjct 969541 ATCTTAGCTTTGACATTCTCAATGGTGTCGCTGGGTTCGACCTCCAGAGTGATGGTCTTG 969482 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 969481 CCAGTGAGGGTCTTCACGAAGATCTGCAT 969453 Score = 111 bits (122), Expect = 3e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || |||||||| || || || ||||| || | || || | |||||||| Sbjct 969205 ACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCC 969146 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || ||||| ||||| |||||||| || || || Sbjct 969145 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGG 969086 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 ||||| |||||| || ||||||||||| Sbjct 969085 ATTTTGGCCTTGACATTTTCAATGGTGTC 969057 >seq81 Length=8687835 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || ||||| || || || || ||||| || || ||||| || | || || Sbjct 2939490 TCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGACAGGGT 2939431 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| || || ||||| || | || |||||||| |||||||| Sbjct 2939430 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCC 2939371 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || || || |||||| |||||||||||||| ||| || ||||| Sbjct 2939370 TTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGTTCAACCTCAAG 2939311 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || || | || || ||||| | |||||| Sbjct 2939310 GGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCAT 2939269 Score = 132 bits (146), Expect = 1e-25 Identities = 165/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || ||||| || || || || ||||| || || ||||| || | || || Sbjct 2926413 TCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCTGAGAGGGT 2926354 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| || || ||||| || | || |||||||| |||||||| Sbjct 2926353 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCC 2926294 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTC 195095 ||| ||||| || || || |||||| |||||||||||||| |||| || || || Sbjct 2926293 TTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTC---ACTTGGCTCAACCTC 2926237 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||| | ||||| || || | || || ||||| | ||||| Sbjct 2926236 AAGGGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCAT 2926192 Score = 132 bits (146), Expect = 1e-25 Identities = 165/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || ||||| || || || || ||||| || || ||||| || | || || Sbjct 2939262 TCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAGAGGGT 2939203 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| || || ||||| || | || |||||||| |||||||| Sbjct 2939202 GCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCC 2939143 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTC 195095 ||| ||||| || || || |||||| |||||||||||||| |||| || || || Sbjct 2939142 TTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTC---ACTTGGCTCAACCTC 2939086 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||| | ||||| || || | || || ||||| | ||||| Sbjct 2939085 AAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 2939041 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || || ||||| || |||||||| || | || || | |||||||| Sbjct 2939705 ACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAGTCAGACAGGGTGCGACCATCTTCC 2939646 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || |||||||| ||||||||||| ||||| || Sbjct 2939645 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 2939586 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||||||||||||||| || || || ||||| | ||||| Sbjct 2939585 ATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTA 2939526 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 2939525 CCAGTGAGGGTCTTGACGAAGATTTGCAT 2939497 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || ||||| || || |||||||| || || || ||||| || | || || Sbjct 2926641 TCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 2926582 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| || || ||||| || | || || ||||| |||||||| Sbjct 2926581 GCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCC 2926522 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || || || ||| ||||||||||||||||| ||| || ||||| Sbjct 2926521 TTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGTTCAACCTCAAG 2926462 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || || | || || || || | ||||| Sbjct 2926461 GGTGATGGTCTTACCAGTGAGGGTCTTGACAAATATCTGCAT 2926420 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || ||||| || || |||||||| || || || ||||| || | || || Sbjct 2927097 TCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 2927038 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| || || ||||| || | || || ||||| |||||||| Sbjct 2927037 GCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCC 2926978 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || || || ||| ||||||||||||||||| || || || || Sbjct 2926977 TTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAG 2926918 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || || | || || ||||| | |||||| Sbjct 2926917 GGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCAT 2926876 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || || ||||| || |||||||| || | || || | |||||||| Sbjct 2927312 ACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAGTCAGAGAGGGTGCGGCCATCTTCC 2927253 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || |||||||| ||||||||||| ||||| || Sbjct 2927252 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 2927193 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||||||||||||||| || || |||||||| | ||||| Sbjct 2927192 ATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTA 2927133 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 2927132 CCAGTGAGGGTCTTGACAAAGATCTGCAT 2927104 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || || ||||| || || ||||| || | || || | |||||||| Sbjct 2927540 ACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 2927481 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || |||||||| ||||||||||| ||||| || Sbjct 2927480 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 2927421 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| |||||||||||||| ||| || || ||||| | ||||| Sbjct 2927420 ATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAGGGTGATGGTCTTA 2927361 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 2927360 CCAGTGAGGGTCTTGACGAAGATCTGCAT 2927332 Score = 118 bits (130), Expect = 2e-21 Identities = 154/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || || ||||| || || ||||| || | || || | |||||||| Sbjct 2926172 ACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATCTTCC 2926113 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || || ||||| ||||||||||| ||||| || Sbjct 2926112 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGG 2926053 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || |||||| |||||||||||||| ||| || || || ||||| | ||| Sbjct 2926052 ATCTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATGGTC 2925996 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || ||||| | ||||| Sbjct 2925995 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 2925964 Score = 116 bits (128), Expect = 8e-21 Identities = 123/162 (76%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || ||||| || || || || ||||| || || ||||| || | || || Sbjct 2926869 TCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCTGAGAGGGT 2926810 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| || || ||||| || | || |||||||| |||||||| Sbjct 2926809 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCC 2926750 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 ||| ||||| || || || ||| ||||||||||||||||| Sbjct 2926749 TTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC 2926708 Score = 113 bits (124), Expect = 1e-19 Identities = 122/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || ||||| || || || || ||||| || || ||||| || | || || Sbjct 2925957 TCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGACAGGGT 2925898 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| || || ||||| || | || || ||||| |||||||| Sbjct 2925897 GCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCC 2925838 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 ||| || || || |||||| |||||| ||||||||||| || Sbjct 2925837 TTCCTTATCCTGGATTTTTGCCTTGACATTCTCAATGGTATC 2925796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109476141350528