Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq302 163 3e-35 >seq302 Length=16539 Score = 163 bits (180), Expect = 3e-35 Identities = 356/529 (67%), Gaps = 3/529 (1%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 || ||| | || |||| |||||| | ||||| || || || || ||||| ||||| || Sbjct 2491 AAAGGTTTAAGTTGTTCTGCTACGCAGATAGGTCCAACCCCTGGTCCTCCGCCTCCGTGA 2550 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 |||||| || || ||||| | || ||||| || |||||||| ||| | || || Sbjct 2551 GGAATAGCAAAGGTTTTATGAAGGTTAAGATGGCAAACATCTGCGCCAATTTTACCAGGA 2610 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 || | | || ||||| ||||| | ||| || ||||| | ||||||||| || || || Sbjct 2611 TTGGTCAAGCCAACCTGAGCATTCATATTCGCGCCATCCATATATACCTGGCCTCCGTTA 2670 Query 138342 TCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGA 138401 || |||| || | | | | ||| || | |||||| || ||||| || || || Sbjct 2671 TCGTGAATAATTTGAGTGACTTCTCTAATAGAAGATTCAAACACCCCATGTGTTGAAGGG 2730 Query 138402 TATGTAATCATAATACATGAGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTA-GATC 138460 || || | ||||| || | | | | ||| | | || || || ||||||| | || Sbjct 2731 TAGGTTACCATAAGGGCTGCCAAATTATCTTTATGCTTTATAGCCTTTTTCTCTAAGGTC 2790 Query 138461 TTTGATGTCTATGTTGCCATCATCATCA-CACTTGACACCTACAACTTTCATTCCTGCCA 138519 || | || || || || | || | | ||| || || ||| |||||| |||| Sbjct 2791 TTCAACATCAATATTTCCGTTTTCTGAAGCTTTTGTTACGATCACCTT-CATTCCGGCCA 2849 Query 138520 TGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTT 138579 | |||||| || ||||| ||||| || || || ||| || || ||||||||||| | Sbjct 2850 TAACTGCAGATGCTGGATTTGTTCCGTGAGCAGAAGATGGGATAAGGCATACATTTCTGT 2909 Query 138580 TATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCT 138639 | | ||||| ||| |||||| ||| ||| | | | ||||||||| || |||| Sbjct 2910 GACCTTCTCCATTAGCTTCATGATAAGCTCTAATTACCATTAATCCTGCATATTCTCCCT 2969 Query 138640 GTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATC 138688 | | ||| | ||||||||| | ||| | | ||||||||||| || Sbjct 2970 GAGCTCCAGAGTTAGGTTGAAGTGAAGTTGCGGAGAAACCTGTGATCTC 3018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578995620807680