Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq136 232 8e-56 >seq136 Length=1264375 Score = 232 bits (256), Expect = 8e-56 Identities = 971/1503 (65%), Gaps = 66/1503 (4%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||| | || | ||||||||||| || || ||| | | | Sbjct 716047 CCGCAGCACATGCTCATGAGAGTGTCTGTCGGCATCCACAAAACTGATATCGATGCAGCC 716106 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || |||| | |||| ||||| ||||| | || || ||||| Sbjct 716107 ATTGAGACCTACAACCTTCTGTCAGAGAGGTG-GTTCACCCACGCTTCTCCTACACTCTT 716165 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || || || || ||| |||| || |||||||| | |||| ||||| || Sbjct 716166 CAACGCAGGAACCAACAGGCCACAGCTGTCTAGCTGCTTCCTGCTTGCCATGAAGGATGA 716225 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | || || |||| || || | | | ||||| | ||||| || | |||||| Sbjct 716226 CAGCATTGAAGGCATTTATGACACGCTGAAGCATTGTGCCCTCATCTCCAAATCGGCTGG 716285 Query 75451 GGGTATTGGGATG-----CACATCCATGATGTGA-----GAGCCAATAAATCTCGTATTC 75500 || || || || || | ||| | | | |||| || ||| | Sbjct 716286 AGGAATCGGTGTGGCGGTCAGCTGCATCAGATCAACGGGGAGC---TACATCGCT----- 716337 Query 75501 GGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560 || ||||| || | || ||||| | | || ||||| | || | ||| ||| | Sbjct 716338 --GGCACAAACGGCAACTCTAATGGTCTGGTCCCCATGCTGAGAGTTTACAACAACACGG 716395 Query 75561 CGCGCTATGTAAATCAAGCGGGGCGTCG-CAAG------GGGTCCATCGCGGTCTACTTG 75613 |||| ||||| | || ||||| | |||| || || |||| | ||| || Sbjct 716396 CGCGTTATGTCGACCA----GGGCGGCAACAAGAGACCGGGAGCCTTCGCCATGTACCTG 716451 Query 75614 GAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGA 75672 || |||||||| || | | || ||||| ||| | | || ||| ||| | || Sbjct 716452 GAGCCATGGCACTTTGACGTGTTTGACTTCCTGGAGCTGAAGAAG-AACACGGGTAAGGA 716510 Query 75673 AGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCG 75732 ||| || |||||||| |||| | |||||||| || ||| | ||||||||| | Sbjct 716511 TGAGCAAAGGGCCAGAGATCTTTTTTATGCACTGTGGATCCCTGACTTGTTCATGAAGAG 716570 Query 75733 GGTTGAGGAGGGTGGTCAA---TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTC 75789 || |||| | ||| |||||||| | ||||| || || || || || Sbjct 716571 AGT---GGAGAGCAACCAAGACTGGTCTCTGATGTGTCCGAACGAGTGCCCCGGGCTGGA 716627 Query 75790 CGAC-GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAG 75848 ||| || | ||| ||||||||||| |||||||| || ||||| ||||||| || | Sbjct 716628 CGAATGCTGGGGG-GAGGAGTTTGAGCAGCTCTACACCAAATATGAGAAGGAGGGGAGGG 716686 Query 75849 CCAATGCGACTGTACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAG 75907 ||| |||| || || | | | | || ||| | || ||| | |||| ||||| || Sbjct 716687 TCAA-GCGAGTGGTGAAGGCTCAGCAGGTGTGGTATGCCATTATTGAATCCCAGACAGAA 716745 Query 75908 ACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAAT 75967 || || ||||| || ||||| ||||| || || || |||| |||||| ||||| ||||| Sbjct 716746 ACGGGTACACCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAAT 716805 Query 75968 TTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGAT 76027 |||| || ||||| || || || ||||| |||||| | || ||||| | ||| Sbjct 716806 CTGGGCACCATCAAATGCAGCAACCTCTGCACAGAAATTGTTGAATACACCAGCCACGAT 716865 Query 76028 GAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACT 76087 ||| ||| || || ||| |||| || ||||| || | ||| |||| ||| Sbjct 716866 GAGGTGGCGGTGTGTAATCTGGCCTCCATCGCTCTCAACATGTACGTCACCCCTGAG--- 716922 Query 76088 CGCACTTTTGATTATGAAAAACT-TCATGAAATCA-CAAAG--ATTGTTACCAAAAATCT 76143 || || ||||| | | ||||||| |||| | | | ||||| || || ||| || || Sbjct 716923 CGGACCTTTGACTTTAAAAAACTGTCAT-ATGTGACCAAAGTAATCGT---CAAGAACCT 716978 Query 76144 AAACCGAGTCATTGACAGAAATTTTTATCCCGTTG-AGACTGCGCGAAAGTCTAATATGC 76202 ||| |||| |||| || | ||||| || | || || | | ||| || | || Sbjct 716979 GAACAAGATCATAGACATTAACTACTATCCAGTGGTTGAAGCCGAG-AGGTCCAACAAGC 717037 Query 76203 GACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCT 76262 | ||| | || || || | |||||||| ||| | || |||| || || || || Sbjct 717038 GCCACCGGCCAATAGGAATCGGTGTTCAGGGTTTGGCTGATGCCTTCATCCTGATGCGTC 717097 Query 76263 ACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATC 76322 || | ||||| || || || | | || | |||||||| ||||| || Sbjct 717098 ACCCCTTTGAAAGCCCCGAGGCTCAGCTGCTCAACATCCACATCTTTGAGACCATCTACT 717157 Query 76323 ACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTG 76382 |||| |||||||||| || || || |||| | | | || |||| ||||| | || Sbjct 717158 ACGCCGCCCTGGAGGCAAGCTGCGAGCTGGCCGCCGAGCTCGGCCCCTACGAGACGTATG 717217 Query 76383 AGGGTTCTCCCGCGTC-CCAAGGG-GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA 76440 | || ||||| ||| |||||| || |||| || ||||||| || || || | Sbjct 717218 AAGGCTCTCC--TGTCAGCAAGGGCACCCTCCAGTACGACATGTGGG-AGAAGACGCCCA 717274 Query 76441 GCTCAAC--TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAAC 76498 || | | | ||||||| | | || ||||| ||| || | || | | ||| Sbjct 717275 -CTGACCTGTGCGACTGGAAGCTGCTGAAGGAGAAGATCGCCAAGCACGGCGTGAGGAAC 717333 Query 76499 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 76558 || || || |||| || ||||| |||||||||||||| || ||| |||| || || || Sbjct 717334 AGCCTGCTGCTGGCCCCGATGCCCACAGCCTCCACCGCCCAGATCCTGGGCAACAACGAG 717393 Query 76559 TGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTC 76618 | |||| | ||||||| ||||||||| | || |||| | || |||||| Sbjct 717394 TCTATTGAGGCCTACACAAGCAACATCTACACCCGCAGGGTCCTCTCCGGAGAGTTTCAG 717453 Query 76619 ATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATG 76678 || ||||| || || |||| ||||| | | ||| || || ||| | |||| ||| Sbjct 717454 ATCGTCAATCCTCATCTGCTCAAGGACCTGACGGAGAGAGGACTGTGGAACGAGGAGATG 717513 Query 76679 AAG 76681 ||| Sbjct 717514 AAG 717516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566736465920