Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq136 87.8 5e-12 >seq136 Length=1264375 Score = 87.8 bits (96), Expect = 5e-12 Identities = 369/571 (65%), Gaps = 10/571 (2%) Strand=Plus/Minus Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATC 155642 ||| | || || ||||||||||| ||||| ||| | || | | ||||||| ||||| Sbjct 716900 AGAGCGATGGAGGCCAGATTACACACCGCCACCTCATCGTGGCTGGTGTATTCAACAATT 716841 Query 155643 TCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTA 155702 || ||| ||||| | ||||||||||| | ||||| |||||| || ||||| Sbjct 716840 TCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTG 716781 Query 155703 CAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTT 155762 || || || ||||| || ||||| || || || || || |||| | || | ||| Sbjct 716780 CAGGCGTCTTTGTACAGCATGTACGGTGTACCCGTTTCTGTCTGGGATTCAATAATGGCA 716721 Query 155763 AGCCAGAGGTCACGGGCATTAATTTGCTTG-TTGTATCTGCCTTCCGACTCATATTTCAT 155821 ||| | | | || || | || | ||| || || ||| ||||||||| | Sbjct 716720 TACCACACCTGCTGAGCCTTCA-CCACTCGCTTGACCCTCCCCTCCTTCTCATATTTGGT 716662 Query 155822 ATACAGC-GTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGC 155880 || ||| | || | ||||| || | || || ||| || ||||||| | || | Sbjct 716661 GTAGAGCTGCTC-AAACTCCTCCCCCCAGCATTCGTCCAGCCCGGGGCACTCGTTCGGAC 716603 Query 155881 AAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAA 155940 | | ||| ||||| || || | || | || ||| || | ||| ||| | Sbjct 716602 ACATCAGAGACCAGTCTTGGTTGCTCTCCACTCTCTTCATGAACAAGTCAGGGATCCACA 716543 Query 155941 TAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCTTCCGTAGCTCT 155999 ||||| ||||| || || ||| || ||| | | | ||||| |||||| ||||| Sbjct 716542 GTGCATAAAAAAGATCTCTGGCCCTTTGCTCATCCTTACCCGTG-TTCTTCTTCAGCTCC 716484 Query 156000 AAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGC-AAAACTACC--ATTC 156056 | ||| || | ||| || ||||||||| ||||| || || || || || Sbjct 716483 AGGAAGTCAAACACGTCAAAGTGCCATGGCTCCAGGTACATGGCGAAGGCTCCCGGTCTC 716424 Query 156057 CTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATA 156116 | ||||| ||||| || ||||| || || || || ||| | || | ||||| || | Sbjct 716423 TTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACC 716364 Query 156117 ATACCATTGGAAGTGCCATTGGTTCC-GCGA 156146 | |||||| || |||| || || || |||| Sbjct 716363 AGACCATTAGAGTTGCCGTTTGTGCCAGCGA 716333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810358657408