Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq65 100 5e-16 seq173 98.7 2e-15 >seq65 Length=22759279 Score = 100 bits (110), Expect = 5e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 ||||||||||| || || ||||| | |||| ||| |||||||| |||||||| || ||| Sbjct 13069261 TGGTGGTACTACATCTCCAAAGGAGTGGAATTCTTGGATACAGTCTTTTTCATCCTGAGG 13069320 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTT 58497 || ||||| ||||| || ||||| || ||||| || ||||| | || ||||| Sbjct 13069321 AAGAAGTTCAATCAGGTCAGCTTCCTCCACGTCTACCATCACTGCACCATGTT 13069373 >seq173 Length=10147857 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 58377 GAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCA 58436 |||| | |||||||| | || |||||||| || || ||| | || ||||||||||| | Sbjct 3515427 GAGCTCTGTGGTGGTATTTCATCTCTAAAGGCATCGAGTACCTGGACACAGTGTTTTTTA 3515486 Query 58437 TACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGT 58496 | || |||||||| || || || |||| ||| || || || || || || | || |||| Sbjct 3515487 TCCTGAGGAAAAAATTCAACCAGGTTACCTTCCTGCATGTCTACCACCACTGCACCATGT 3515546 Query 58497 TTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | || | | ||| | || || |||||| | |||||||| ||| Sbjct 3515547 TCACGCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 3515590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903406863626240