Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq166 87.8 4e-12 seq81 86.0 1e-11 >seq166 Length=972737 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || ||||| || || || ||||||||||| || || |||| Sbjct 969000 CAGATCTTTGTGAAGACCCTCACTGGTAAGACCATCACTTTGGAGGTTGAGCCCAGTGAC 969059 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| || || || || || ||||| || |||||| || Sbjct 969060 ACCATTGAAAATGTCAAGGCCAAAATCCAGGATAAGGAAGGCATCCCTCCGGACCAGCAG 969119 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || |||||| |||||||||| | || | | || |||||| || Sbjct 969120 AGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAACATC 969179 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || || ||||| Sbjct 969180 CAGAAGGAGTCCACCCTCCATCTTGT 969205 >seq81 Length=8687835 Score = 86.0 bits (94), Expect = 1e-11 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||| || || ||||| |||||||||| ||| ||||||| || || | ||||||||| Sbjct 2939705 ACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAGTCAGACAGGGTGCGACCATCTTCC 2939646 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCC 204848 |||||||| ||||| ||||| |||| Sbjct 2939645 AGCTGCTTGCCGGCAAAGATCAGCC 2939621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181814985441664