Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq152 134 2e-26 >seq152 Length=5132711 Score = 134 bits (148), Expect = 2e-26 Identities = 136/177 (77%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | |||||| | ||||||||| || || | ||||||||| || ||||| Sbjct 3436283 CTTGAGTCCTGTGATGTGGGCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATATTGAA 3436342 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || ||||| ||||| || || || | |||||||||||| ||||| ||||| || || Sbjct 3436343 AGGCACTCCCAGACCCATATCACCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATC 3436402 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC 147158 |||| |||||||| ||| |||||| || ||||| ||||| ||||||||| Sbjct 3436403 ACACACGCTGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCATTTGGGGCAGGTC 3436459 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/140 (76%), Gaps = 6/140 (4%) Strand=Plus/Plus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 || |||||||||||||||||||| || ||||| || ||||||||||| || ||||| Sbjct 3436888 GCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTCGCCCTCCTCTCTGTCT 3436947 Query 147343 GAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 | ||| |||| | ||| || |||| ||||||||| ||| |||||||| ||| Sbjct 3436948 GTGAA-CCCG--AGATTGTCCAGGAACTGCCGGGACCCGTTGGCCTCCCAGATCTTCACC 3437004 Query 147400 CCCTTGGCGGAGAGCTCCTT 147419 || || | ||||||||||| Sbjct 3437005 CCTTTCTCCGAGAGCTCCTT 3437024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583485199257600