Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq81 122 8e-23 seq166 116 3e-21 >seq81 Length=8687835 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || ||| || | || ||||||||||| || ||||| Sbjct 2926611 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAA 2926552 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | Sbjct 2926551 GATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 2926492 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | ||| ||||| | ||||| || ||||| || | || || || Sbjct 2926491 CTCAATGGTGTCGCTGGGTTCAACCTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTGAC 2926432 Query 35725 AAATATCTGCAT 35736 |||||||||||| Sbjct 2926431 AAATATCTGCAT 2926420 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | || ||| || | || ||||||||||| || ||||| Sbjct 2927522 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 2927463 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || ||||||||| |||||| ||| | | | Sbjct 2927462 ATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 2927403 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||| | ||| ||||||| ||||| || ||||| || | || || || Sbjct 2927402 TCAATGGTGTCGCTGGGTTCAACCTCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGACG 2927343 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 2927342 AAGATCTGCAT 2927332 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 2926838 TCTTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 2926779 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || ||||||||| |||||| ||||| | Sbjct 2926778 ATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTC 2926719 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||| | || ||||||| ||||| || ||||| || | || || ||| Sbjct 2926718 TCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGACA 2926659 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 2926658 AAGATCTGCAT 2926648 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || ||| || | || ||||||||||| || ||||| Sbjct 2927067 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAA 2927008 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | Sbjct 2927007 GATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 2926948 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||||| ||||| || ||||| || | || || || Sbjct 2926947 CTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGAC 2926888 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 2926887 GAAGATTTGCAT 2926876 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | || ||| || | || ||||||||||| || ||||| Sbjct 2939459 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 2939400 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || ||||||||| |||||| ||| | | | Sbjct 2939399 ATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 2939340 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||| | ||| ||||| | ||||| || ||||| || | || || || Sbjct 2939339 TCAATGGTGTCGCTGGGTTCAACCTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTGACG 2939280 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 2939279 AAGATTTGCAT 2939269 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | || ||| || | || ||||||||||| || ||||| Sbjct 2925926 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAG 2925867 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || |||||| || | |||| || ||||| ||| ||| ||| ||| | | | Sbjct 2925866 ATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTATCCTGGATTTTTGCCTTGACATTC 2925807 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || ||||| | || ||||||| ||||| || || || || | || |||||| Sbjct 2925806 TCAATGGTATCGCTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCACA 2925747 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 2925746 AAGATCTGCAT 2925736 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || || ||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 2927294 TCTTTCTGGATATTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 2927235 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || ||||||||| |||||| ||||| | Sbjct 2927234 ATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTC 2927175 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||| | || ||||| | ||||| || ||||| || | || || ||| Sbjct 2927174 TCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTGACA 2927115 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 2927114 AAGATCTGCAT 2927104 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || || ||||| || | || ||| || | || ||||||||||| || ||||| Sbjct 2939687 TCTTTCTGGATATTGTAGTCAGACAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAG 2939628 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || ||||||||| |||||| ||||| | Sbjct 2939627 ATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTC 2939568 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||| | || ||||||| ||||| || ||||| || | || || || Sbjct 2939567 TCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTACCAGTGAGGGTCTTGACG 2939508 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 2939507 AAGATTTGCAT 2939497 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 2926382 TCTTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 2926323 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || ||||||||| |||||| ||| | | | Sbjct 2926322 ATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 2926263 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || ||||| || | || || || Sbjct 2926262 TCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTGACG 2926203 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 2926202 AAGATCTGCAT 2926192 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 2926154 TCTTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 2926095 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || |||||| || | |||| || ||||||||| |||||| ||| | | | Sbjct 2926094 ATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 2926035 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || || | || || || Sbjct 2926034 TCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACG 2925975 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 2925974 AAGATCTGCAT 2925964 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/196 (71%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 2939231 TCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAG 2939172 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || ||||||||| |||||| ||| | | | Sbjct 2939171 ATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 2939112 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || || | || || || Sbjct 2939111 TCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACG 2939052 Query 35726 AATATCTGCAT-TCTG 35740 || |||||||| |||| Sbjct 2939051 AAGATCTGCATGTCTG 2939036 >seq166 Length=972737 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 969188 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 969129 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||||| ||| | || ||||| ||| ||| || ||| | | | Sbjct 969128 GATCAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGGATTTTGGCCTTGACATT 969069 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | || ||||||| ||||| || ||||| || | || ||||| Sbjct 969068 TTCAATGGTGTCACTGGGCTCAACCTCCAAAGTGATGGTCTTACCAGTGAGGGTCTTCAC 969009 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 969008 AAAGATCTGCAT 968997 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || |||| ||||||||||| || ||||| Sbjct 969644 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAA 969585 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || ||||| ||| |||||| || | | | Sbjct 969584 GATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTAGCTTTGACATT 969525 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | ||| ||||||| ||||| || || || || | || ||||| Sbjct 969524 CTCAATGGTGTCGCTGGGTTCGACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCAC 969465 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 969464 GAAGATCTGCAT 969453 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || | || || |||||||| || || || Sbjct 969416 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAA 969357 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | || || |||||| ||| || ||| | | | Sbjct 969356 GATGAGACGCTGCTGGTCTGGAGGGATGCCTTCTTTGTCCTGGATTTTGGCCTTGACATT 969297 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||||| ||||| || || || || | || ||||| Sbjct 969296 CTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 969237 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 969236 GAAGATCTGCAT 969225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791436190720