Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq152 113 4e-20 >seq152 Length=5132711 Score = 113 bits (124), Expect = 4e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || |||||||| ||||||||||| || || || || |||| |||||||||||| Sbjct 3436882 TATTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTCGCCCTCCTCT 3436941 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | || |||||| | |||||||| || | || ||||||| || |||||||||||| Sbjct 3436942 CTGTCTGTGAACCCGAGATTGTCCAGGAACTGCCGGGACCCGTTGGCCTCCCAGATCTTC 3437001 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043 ||||| |||||||||||||| Sbjct 3437002 ACCCCTTTCTCCGAGAGCTCCTTGG 3437026 Score = 113 bits (124), Expect = 4e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361 |||||||||||||| ||||||||||||||||| || ||||||| || | || | Sbjct 3437026 CCAAGGAGCTCTCGGAGAAAGGGGTGAAGATCTGGGAGGCCAACGGGTCCCGGCAGTTCC 3436967 Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421 ||||||| | |||||| || | |||||||||||| |||| || || || || |||| Sbjct 3436966 TGGACAATCTCGGGTTCACAGACAGAGAGGAGGGCGACCTGGGACCTGTGTATGGTTTCC 3436907 Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446 ||||||| |||||||| || || || Sbjct 3436906 AGTGGAGGCACTTTGGTGCAGAATA 3436882 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| || || || ||||| || || || ||||| ||||| || | ||| Sbjct 3436299 TGGGCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATATTGAAAGGCACTCCCAGACCC 3436358 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 || || || || || || || ||||| || |||||||| |||| ||| ||| ||| Sbjct 3436359 ATATCACCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCACACACGCTGAACTGG 3436418 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCAT 6768 ||||||| |||||| ||||| || ||||| Sbjct 3436419 CAGAGGGCGTGGCAGGGGGGCAGAGCCAT 3436447 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636 ||||| || ||||| |||||| |||||||||| ||| ||| |||| |||||||| Sbjct 3436447 ATGGCTCTGCCCCCCTGCCACGCCCTCTGCCAGTTCAGCGTGTGTGATGGCGAGCTGTCG 3436388 Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 || ||||| || || || || || || ||||| | || ||||| ||||| || || || Sbjct 3436387 TGTCAGCTGTACCAGCGCTCAGGTGATATGGGTCTGGGAGTGCCTTTCAATATCGCCAGC 3436328 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || || ||||||||||| || Sbjct 3436327 TACGCACTTCTTACCTACATGATCGCCCA 3436299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448260248340480