Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq136 509 2e-139 seq119 104 3e-17 >seq136 Length=1264375 Score = 509 bits (564), Expect = 2e-139 Identities = 1295/1961 (66%), Gaps = 23/1961 (1%) Strand=Plus/Minus Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 ||||| || || || ||||||| | ||||| || | | | || ||||||||||| Sbjct 717518 TTCTTCATCTCCTCGTTCCACAGTCCTCTCTCCGTCAGGTCCTTGAGCAGATGAGGATTG 717459 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || || ||||| ||||| || | || || || ||||| || || || || || | || Sbjct 717458 ACGATCTGAAACTCTCCGGAGAGGACCCTGCGGGTGTAGATGTTGCTTGTGTAGGCCTCA 717399 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | ||| || ||||| |||| || || || || || || || ||||| || |||| || Sbjct 717398 ATAGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGC 717339 Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300 | || || || | || || | ||| || || || || ||||| || || || Sbjct 717338 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCGCACAGG 717279 Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360 || | || ||||| | ||||| || || | || || || || || || Sbjct 717278 TCAGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGGTGCCCTTGCTGACAGGAGAGCCT 717219 Query 77361 TTATATGTTTCATAAGGTCCT---TCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417 | ||| || || || || || || | | || || || || || || |||| || Sbjct 717218 TCATACGTCTCGTAGGGGCCGAGCTCGG---CGGCCAGCTCGCAGCTTGCCTCCAGGGCG 717162 Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477 |||| || || || || || || | | ||||| || || || || ||||| Sbjct 717161 GCGTAGTAGATGGTCTCAAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTTTCAAAG 717102 Query 77478 GGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTA 77537 || | | | | || || |||||||| || || |||||||| || || || || || | Sbjct 717101 GGGTGACGCATCAGGATGAAGGCATCAGCCAAACCCTGAACACCGATTCCTATTGGCCGG 717042 Query 77538 TGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTA 77597 || | ||| ||||| | | ||||| | ||||| || ||||||||||| || || Sbjct 717041 TGGCGCTTGTTGGACCTCTCGGCTTCAACCACTGGATAGTAGTTAATGTCTATGATCTTG 716982 Query 77598 TTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCA 77657 || || || | || | |||||| ||| | ||||| ||| ||||| | | Sbjct 716981 TTCAGGTTCTTGACGATTACTTTGGTCACATATGACAGTTTTTTAAAGTCAAAGGTCCGC 716922 Query 77658 TCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTA 77714 || | || ||||||| | ||| || || || |||||||| || || ||||||| Sbjct 716921 TCAGGGGTGACGTACATGTTGAGAGCGATGGAGGCCAGATTACACACCGCCACCTCATCG 716862 Query 77715 GCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTT 77774 | ||| |||| | || || || || || || || |||||||| ||||||||||| Sbjct 716861 TGGCTGGTGTATTCAACAATTTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGATTC 716802 Query 77775 TGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCA 77834 || ||||||||||| | ||||| | ||| || || || || |||| || || ||||| Sbjct 716801 TGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGTGTACCCGTTTCT 716742 Query 77835 ATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTTGTATC 77892 |||| ||||| ||||| | | ||| || || || ||| || | || ||| | Sbjct 716741 GTCTGGGATTCAATAATGGCATACCACAC--CTGCTGAGCCTTCACCACTCGCTTGACCC 716684 Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCA 77952 || ||| | ||||||| || || ||| | ||||| || || ||||| || |||| Sbjct 716683 TCCCCTCCTTCTCATATTTGGTGTAGAGCTGCTCAAACTCCTCCCCCCAGCATTCGTCCA 716624 Query 77953 ATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCA 78012 || ||||| || || || ||||||| |||||||| | || |||| |||| Sbjct 716623 GCCCGGGGCACTCGTTCGGACACATCAGAGACCAGTCTTGGTTGCTCTCCACTCTCTTCA 716564 Query 78013 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTC 78072 | || | ||||| ||||| || ||| ||| ||||||| || || || || || || | Sbjct 716563 TGAACAAGTCAGGGATCCACAGTGCATAAAAAAGATCTCTGGCCCTTTGCTCATCCTTAC 716504 Query 78073 CTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 78132 | || ||||| || || || || || || | | ||| | |||||||| || || || | Sbjct 716503 CCGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACGTCAAAGTGCCATGGCTCCAGGTACA 716444 Query 78133 TTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTAT 78192 | || | |||| |||| || || || ||||| || | ||| | || ||||| || | Sbjct 716443 TGGCGAAGGCTCCCGGTCTCTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGT 716384 Query 78193 AAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTC 78252 ||||||||| ||| || | | ||| ||||| | || ||||| |||| || || || | Sbjct 716383 AAACTCTCAGCATGGGGACCAGACCATTAGAGTTGCCGTTTGTGCCAGCGATGTAGCTCC 716324 Query 78253 CACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | ||| | || || | | | || |||||||| ||| || || || || | Sbjct 716323 CCGTTGATCTGATGCAGCTGACCGCCACACCGATTCCTCCAGCCGATTTGGAGATGAGGG 716264 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372 | ||| | |||| || || || || || || || ||||||||| ||||| ||| || | Sbjct 716263 CACAATGCTTCAGCGTGTCATAAATGCCTTCAATGCTGTCATCCTTCATGGCAAGCAGGA 716204 Query 78373 AACAGCTAGACATTTG----ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428 | |||||||||| || || || |||||||| || || | ||| ||||| || Sbjct 716203 AGCAGCTAGACAGCTGTGGCCTGTTG----GTTCCTGCGTTGAAGAGTGTAGGAGAAGCG 716148 Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCAT 78488 || || ||||| | || || || || ||||| || ||||| |||| || || || | Sbjct 716147 TGGGTGAACCACCTCTCTGACAGAAGGTTGTAGGTCTCAATGGCTGCATCGATATCAGTT 716088 Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 | || || || || | || | ||| | ||| ||||| || | ||| || || Sbjct 716087 TTGTGGATGCCGACAGACACTCTCATGAGCATGTGCTGCGGACGCTCAGCCACTTTGCCG 716028 Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 78608 | || ||||||| ||| || |||| ||| || || ||||| ||||||| || || Sbjct 716027 GTGATCTTCAACAGGTACGACCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGAAA 715968 Query 78609 TCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATG 78668 ||||| |||||||| || | || || || ||||||| | |||||| || | | Sbjct 715967 TCTCTGTCGTAAATGATGGCCGAGTTGAGGCGGTCTTTGTTCTCAAGAACAATGTCGAGG 715908 Query 78669 ACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAA 78728 | || || || || || || ||| ||| || | ||||| | | Sbjct 715907 GTCTCCTTGGAGATCATGGGGGAGTGTTTTTTATTCAGAGGGTTGATGTAGTTGTACAGG 715848 Query 78729 TCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATT 78788 || ||||| || ||||| || | ||| || || || ||||| || || || ||||| || Sbjct 715847 TCCTCCATCACCTCACTGAACACTTTCTTCGTCTCTTTGTGCAGGTTGGAAACAGCGATC 715788 Query 78789 CTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCC 78848 | |||||| || || || || || || |||| || || |||||| || || || || Sbjct 715787 CGTGCAGCGAGGATGGCGTAGTCGGGGTGTTTGGTTGTGAGAGTGGCGGCGATCTCAGCT 715728 Query 78849 GCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATG 78908 || | | || | ||| | || ||||| || | || | || ||||| || |||||| Sbjct 715727 GCCAGCGTGTCGAGCTCCACGGTGGTGACTCCGCTGTACAAACCCTGAATCACCTTCATG 715668 Query 78909 GCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCT-AATACG 78967 | ||||| | | || || ||||| |||| ||||| |||||| || || |||| || || Sbjct 715667 GTGATTTGGGCCGGGTCCACAAAGTCAGAGTTCAGTCCATAGCA-AAGCTTCTGGATGCG 715609 Query 78968 AGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008 ||| ||||||||||| || || || ||| | || ||||| Sbjct 715608 AGAGGTGATTTTATCGAACATGACGCGCTCTTGGCGTCCAT 715568 Score = 96.9 bits (106), Expect = 5e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| |||||||| |||||||| ||||||||| || | || || || || || || | Sbjct 718159 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTTGGCTCTGCGATGTGGATGT 718100 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| ||||| || || |||||| | || || | || || ||||| || | ||||||| Sbjct 718099 TCAGGGACTGGCTCTGGTCGATGTAGGCGCCACGGTCGGCGGCCATCTTCAGTATGGTCT 718040 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 | || | |||||||| | ||||| | | || || | ||||||||||| Sbjct 718039 TCTGGGAGATTTCCCACACCGTTTTATACAGCTGCTTCAGATCATCTGGAA 717989 >seq119 Length=8001379 Score = 104 bits (114), Expect = 3e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 77732 TATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTT 77791 |||||| || ||||||||||| ||||||| ||||||| ||| || ||||||||||| | Sbjct 7003604 TATCTCTGTGCATAGATTACTGGATTTGATGGTGCCCAAATTCTGCTGGTTGCTCTTCCT 7003545 Query 77792 ATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAAT 77851 |||||| | |||||| || || || | || || || ||||| ||||||| ||||| || Sbjct 7003544 ATTGCAGGCGTCCTTGTAGAGCATGTATGGTGTACCAGTTTCTGTCTGTGACTCGATGAT 7003485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665465589760