Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq136 517 2e-141 seq119 89.7 7e-13 >seq136 Length=1264375 Score = 517 bits (572), Expect = 2e-141 Identities = 1304/1973 (66%), Gaps = 21/1973 (1%) Strand=Plus/Minus Query 75626 TGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTC 75685 ||||||||||| | || ||| | ||||| ||||| || ||||||| | |||| Sbjct 717548 TGAATGGATCCATTGTGAGCTATCAGCTGGTTCTTCATCTCCTCGTTCCACAGTCCTCTC 717489 Query 75686 TCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTT 75745 || || | | | || ||||||||||| || || ||||| ||||| || | || || Sbjct 717488 TCCGTCAGGTCCTTGAGCAGATGAGGATTGACGATCTGAAACTCTCCGGAGAGGACCCTG 717429 Query 75746 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCA 75805 || ||||| || || || || || | || | ||| || ||||| |||| || || || Sbjct 717428 CGGGTGTAGATGTTGCTTGTGTAGGCCTCAATAGACTCGTTGTTGCCCAGGATCTGGGCG 717369 Query 75806 GTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATT 75865 || || || || ||||| || |||| || | || || || | || || | ||| Sbjct 717368 GTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATC 717309 Query 75866 TTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTAT 75925 || || || || ||||| || || || || | || ||||| | ||||| Sbjct 717308 TTCTCCTTCAGCAGCTTCCAGTCGCACAGGTCAGTGGGCGTCTTCTCCCACATGTCGTAC 717249 Query 75926 TGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCA 75985 || || | || ||||| || || || | ||| || ||||| | ||| || | Sbjct 717248 TGGAGGGTGCCCTTGCTGACAGGAGAGCCTTCATACGTCTCGTAGGGGCCGAGCTCGGCG 717189 Query 75986 GCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTA 76045 || || ||||| || ||||| | || |||| || || || || || || | | || Sbjct 717188 GCCAGCTCGCAGCTTGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATGTGGATGTTG 717129 Query 76046 AGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGT 76105 || || || || | || ||||| || | | | | || || || ||||| || | Sbjct 717128 AGCAGCTGAGCCTCGGGGCTTTCAAAGGGGTGACGCATCAGGATGAAGGCATCAGCCAAA 717069 Query 76106 CCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATA 76165 |||||||| || || || || || | || | ||| ||||| | || ||||| | Sbjct 717068 CCCTGAACACCGATTCCTATTGGCCGGTGGCGCTTGTTGGACCTCTCGGCTTCAACCACT 717009 Query 76166 GGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCC 76225 || || || ||||| ||||| || || || || || |||| | |||||| ||| | Sbjct 717008 GGATAGTAGTTAATGTCTATGATCTTGTTCAGGTTCTTGACGATTACTTTGGTCACATAT 716949 Query 76226 TTTAGTTTGAGAAAATCAAATTTTC---CATCTATCACAAACATATTAAGAGCTATAGAT 76282 ||||| ||| ||||| | | || | || |||| || ||||| || || Sbjct 716948 GACAGTTTTTTAAAGTCAAAGGTCCGCTCAGGGGTGACGTACATGTTGAGAGCGATGGAG 716889 Query 76283 GCTAGATTACAAACGGCTACCTCAT--TAGCATTGGCATATTGTATTATCTCCGTGCATA 76340 || |||||||| || || ||||||| | || ||| |||| | || || ||||| | Sbjct 716888 GCCAGATTACACACCGCCACCTCATCGTGGC--TGGTGTATTCAACAATTTCTGTGCAGA 716831 Query 76341 GATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCT 76400 | || || || ||||| || || ||||| || ||||||||||| |||| || | ||| | Sbjct 716830 GGTTGCTGCATTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTT 716771 Query 76401 TATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGA 76460 | || || | |||| || || ||||| |||| ||||| ||||| | | ||| || Sbjct 716770 TGTACAGCATGTACGGTGTACCCGTTTCTGTCTGGGATTCAATAATGGCATACCACAC-- 716713 Query 76461 CT-CT-AGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCG 76518 || || ||| || | | ||| | | ||| | ||||||| || || | | | Sbjct 716712 CTGCTGAGCCTTCACCACTCGCTTGACCCTCCCCTCCTTCTCATATTTGGTGTAGAGCTG 716653 Query 76519 TTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGA 76578 ||||| || || ||||| || |||| || || || || ||||||||||||| || Sbjct 716652 CTCAAACTCCTCCCCCCAGCATTCGTCCAGCCCGGGGCACTCGTTCGGACACATCAGAGA 716593 Query 76579 CCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638 ||| || | || || | ||||| || | ||||| ||||| || ||| ||| Sbjct 716592 CCAGTCTTGGTTGCTCTCCACTCTCTTCATGAACAAGTCAGGGATCCACAGTGCATAAAA 716533 Query 76639 TAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCAT 76698 ||||||| || || | || || || || || ||||| || || || ||||| || | Sbjct 716532 AAGATCTCTGGCCCTTTGCTCATCCTTACCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAA 716473 Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCC 76758 | ||| | |||||||| || || || || || | | ||||||| || || || || Sbjct 716472 CACGTCAAAGTGCCATGGCTCCAGGTACATGGCGAAGGCTCCCGGTCTCTTGTTGCCGCC 716413 Query 76759 CTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGA 76818 ||| || | ||| | || ||||| || |||||||||| ||| || | | || ||||| Sbjct 716412 CTGGTCGACATAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACCAGACCATTAGA 716353 Query 76819 TGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCC 76878 | || ||||| |||| || || || || || | || || | | | || Sbjct 716352 GTTGCCGTTTGTGCCAGCGATGTAGCTCCCCGTTGATCTGATGCAGCTGACCGCCACACC 716293 Query 76879 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTC 76938 |||||||| ||| ||| ||||| || ||||| | |||| |||||||| ||||| || Sbjct 716292 GATTCCTCCAGCCGATTTGGAGATGAGGGCACAATGCTTCAGCGTGTCATAAATGCCTTC 716233 Query 76939 TATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG----ATGATGAACAG 76994 || || |||||| ||||| ||| || || |||||||||| || || || | Sbjct 716232 AATGCTGTCATCCTTCATGGCAAGCAGGAAGCAGCTAGACAGCTGTGGCCTGTTG----G 716177 Query 76995 TTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGT 77054 ||||||| || || | ||||||||| || || |||||||| | || || || || |||| Sbjct 716176 TTCCTGCGTTGAAGAGTGTAGGAGAAGCGTGGGTGAACCACCTCTCTGACAGAAGGTTGT 716117 Query 77055 ATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACA 77114 | || ||||| |||| || ||||| || || || || |||| || | ||| | || Sbjct 716116 AGGTCTCAATGGCTGCATCGATATCAGTTTTGTGGATGCCGACAGACACTCTCATGAGCA 716057 Query 77115 TATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 77174 | ||||| || || || | || | || ||||||| ||| || |||| || Sbjct 716056 TGTGCTGCGGACGCTCAGCCACTTTGCCGGTGATCTTCAACAGGTACGACCGCTCCAGAG 715997 Query 77175 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTT 77234 | || || ||||| ||||||| || || ||||| |||||||| || |||| || || Sbjct 715996 TCTTGAAGCCAAAGAAGTTGTAGGAGAAATCTCTGTCGTAAATGATGGCCGAGTTGAGGC 715937 Query 77235 TGTCCTTATATTTGGTAACAATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATTC 77294 ||| || | | |||||| || | | | || || || || || || || Sbjct 715936 GGTCTTTGTTCTCAAGAACAATGTCGAGGGTCTCCTTGGAGATCATGGGGGAGTGTTTTT 715877 Query 77295 CATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttG 77354 ||| ||| || | ||||| | | ||| ||||| || || || || | ||| || | Sbjct 715876 TATTCAGAGGGTTGATGTAGTTGTACAGGTCCTCCATCACCTCACTGAACACTTTCTTCG 715817 Query 77355 TTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTT 77414 | || ||||| || || || || || || | ||||| || || || ||||| || |||| Sbjct 715816 TCTCTTTGTGCAGGTTGGAAACAGCGATCCGTGCAGCGAGGATGGCGTAGTCGGGGTGTT 715757 Query 77415 GTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTC 77474 || ||| ||||| || || || || || | || || | || | || || |||| Sbjct 715756 TGGTTGTGAGAGTGGCGGCGATCTCAGCTGCCAGCGTGTCGAGCTCCACGGTGGTGACTC 715697 Query 77475 CGTTATATAGCCCTTGAATAACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGT 77534 || | || | || ||||| || ||||||| |||| | || || ||||| || | || Sbjct 715696 CGCTGTACAAACCCTGAATCACCTTCATGGTGATTTGGGCCGGGTCCACAAAGTCAGAGT 715637 Query 77535 TCAAACCATAACATAATTTTCT-AATACGAGATGTGATTTTATCAAACATGAC 77586 ||| ||||| || || |||| || ||||| ||||||||||| |||||||| Sbjct 715636 TCAGTCCATAGCA-AAGCTTCTGGATGCGAGAGGTGATTTTATCGAACATGAC 715585 Score = 93.3 bits (102), Expect = 6e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| |||||||| |||||||| || |||||| || | || || || || || || | Sbjct 718159 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTTGGCTCTGCGATGTGGATGT 718100 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 ||| ||||| || || |||||| | || || | || || ||||| || | ||||||| Sbjct 718099 TCAGGGACTGGCTCTGGTCGATGTAGGCGCCACGGTCGGCGGCCATCTTCAGTATGGTCT 718040 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 | || | |||||||| | ||||| | | || || | ||||||||||| Sbjct 718039 TCTGGGAGATTTCCCACACCGTTTTATACAGCTGCTTCAGATCATCTGGAA 717989 >seq119 Length=8001379 Score = 89.7 bits (98), Expect = 7e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || |||| ||| || || || ||||| || || || || ||||||| ||||| || ||| Sbjct 7001343 CTGAATACTTTCTTGGTCTCTTTGTGCAGGTTAGACACAGCTATTCGTGCAGCCAGGATT 7001284 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| |||| || ||| |||||| || | || || || | ||| || | Sbjct 7001283 GCATAGTCAGGGTGTTTGGTGGTGAGGGTGGCAGCAGTCTCAGCTGCAAGAGTGTCCAGC 7001224 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCAT 77502 || | ||| || ||||| | || || || || || || ||||| Sbjct 7001223 TCCACAGTGGTGACTCCACTGTACAGACCCTGGATCACCTTCAT 7001180 Score = 86.0 bits (94), Expect = 9e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 76327 TATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTT 76386 |||||| |||||||||||||| | ||||| || || | ||| || ||||||||||| | Sbjct 7003604 TATCTCTGTGCATAGATTACTGGATTTGATGGTGCCCAAATTCTGCTGGTTGCTCTTCCT 7003545 Query 76387 GTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446 || || | |||||| || || | | || || |||||||| ||||||| ||||| || Sbjct 7003544 ATTGCAGGCGTCCTTGTAGAGCATGTATGGTGTACCAGTTTCTGTCTGTGACTCGATGAT 7003485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930977914880