Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq166 163 7e-35 >seq166 Length=972737 Score = 163 bits (180), Expect = 7e-35 Identities = 162/208 (78%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || ||||| || || || |||||||| ||||| || || ||| Sbjct 969228 CAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGA--GCCCAGCG 969285 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| ||||| || || |||||||||||||| |||||||| ||||||| Sbjct 969286 ACACCATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAAGGCATCCCTCCAGACCAGC 969345 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || ||||||||||| || ||||| |||||||| | || || |||| || ||| Sbjct 969346 AGCGTCTCATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACTACAACA 969405 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || |||||||| Sbjct 969406 TCCAGAAGGAGTCCACCCTCCATCTTGT 969433 Score = 122 bits (134), Expect = 2e-22 Identities = 153/208 (74%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || ||||| || || || ||||| | ||||| || || ||| Sbjct 969000 CAGATCTTTGTGAAGACCCTCACTGGTAAGACCATCACTTTGGAGGTTGA--GCCCAGTG 969057 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| || || ||||| || || ||||| || ||||| |||||||||||||||| Sbjct 969058 ACACCATTGAAAATGTCAAGGCCAAAATCCAGGATAAGGAAGGCATCCCTCCGGACCAGC 969117 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | || || | || || ||| Sbjct 969118 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAACA 969177 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || |||||||| Sbjct 969178 TCCAGAAGGAGTCCACCCTCCATCTTGT 969205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203725277642496