Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq19312 91.5 3e-13 seq23513 89.7 1e-12 seq16117 89.7 1e-12 seq14620 89.7 1e-12 seq11833 89.7 1e-12 seq5907 89.7 1e-12 seq12434 84.2 5e-11 seq7781 84.2 5e-11 seq4503 84.2 5e-11 >seq19312 Length=1651327 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 791563 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 791622 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 791623 CCCCACGTTGGGC 791635 >seq23513 Length=865 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 81 GCCCGGCTAGCTCAGTCGGTAGAGCATAAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 140 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 141 CCCACGTTGGGC 152 >seq16117 Length=464039 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 387420 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 387361 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 387360 CCCACGTTGGGC 387349 >seq14620 Length=4294994 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 122105 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 122164 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 122165 CCCACGTTGGGC 122176 >seq11833 Length=1575278 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 936889 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 936830 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 936829 CCCACGTTGGGC 936818 >seq5907 Length=2227753 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1797735 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1797676 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1797675 CCCACGTTGGGC 1797664 >seq12434 Length=3100 Score = 84.2 bits (92), Expect = 5e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| |||||| ||||| ||||||||||| Sbjct 1614 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCCCATGGTCATGGGTTCGAGC 1673 Query 165770 CCCACGATGGG 165780 |||||| |||| Sbjct 1674 CCCACGTTGGG 1684 >seq7781 Length=866720 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 |||||||||||||||| || ||||| ||||||| | |||||||||||||||||||||| Sbjct 15822 CTAGCTCAGTCGGTAGGGCATGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACG 15763 Query 165776 ATGGGC 165781 ||||| Sbjct 15762 TTGGGC 15757 >seq4503 Length=697660 Score = 84.2 bits (92), Expect = 5e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||| ||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 660174 TTGGCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 660115 Query 165768 GCCCCACGATGGGC 165781 ||||||| ||||| Sbjct 660114 GCCCCACCTTGGGC 660101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1056662720151660