Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq11199 87.8 2e-12 seq16819 84.2 2e-11 seq6006 84.2 2e-11 seq11759 82.4 8e-11 >seq11199 Length=1679328 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| ||||||||||| ||||| || || | || | ||||||||| |||| ||||| Sbjct 643754 CCTCATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCTCTTTTCT 643695 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | ||||| | || || || || || ||||| ||||| || || || || | |||||| | Sbjct 643694 TCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCCACTGCTGCAAATG 643635 Query 17106 CGATTAATCGTTC 17118 | | |||||| || Sbjct 643634 CTACTAATCGCTC 643622 >seq16819 Length=1945512 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| ||||||||||||||||| || || || || | || ||||| ||||| |||| Sbjct 739164 CCTCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCT 739105 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 ||| ||| || || | || || |||||||||||||| || || || || | ||||| | Sbjct 739104 TTAGCCAGAAAATAGAAGCAAAAGACCCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 739045 Query 17106 C 17106 | Sbjct 739044 C 739044 >seq6006 Length=139621 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || || || | || ||||||||||| ||||| ||||| |||||||| ||||| Sbjct 86774 ATGTAGGTGTCAATCAACAGACTGTACATTTCAGAGTGGATGTTTTCCATGGCAATCTGG 86833 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 || ||||| ||||| |||||||| | | ||| |||||| Sbjct 86834 AAACCGTAGAAGCAACGGGCTTCAGTCACTTGGACTTCC 86872 >seq11759 Length=1730004 Score = 82.4 bits (90), Expect = 8e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| ||||||||||| ||||| || || | || | ||||||||| || | ||||| Sbjct 147487 CCTCATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCGCTTTTCT 147546 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | ||||| | || || || || || ||||| ||||| || || || || | |||||| | Sbjct 147547 TCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCTACTGCTGCAAATG 147606 Query 17106 CGATTAATCGTTC 17118 | | |||||| || Sbjct 147607 CTACTAATCGCTC 147619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516991295723760