Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq16192 89.7 6e-13
seq1474 84.2 3e-11
seq13173 82.4 9e-11
>seq16192
Length=2652217
Score = 89.7 bits (98), Expect = 6e-13
Identities = 172/251 (69%), Gaps = 2/251 (1%)
Strand=Plus/Minus
Query 83144 AACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGG 83203
||||||||||| ||||| | | |||||| | |||||| ||| ||| | || | | |
Sbjct 10088 AACTTCTCGAAATTCCAAGTGATGTCGTTTCTGCACACGGGACTCCACACGATAAATTTG 10029
Query 83204 GGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAG 83263
||||| ||| || | | || ||||| || || || ||| ||||||
Sbjct 10028 GGGTCATTCATGAAGGGCATTGGCTCATCGCTCGGGAATGGAAGTTTCTCCTTAAGGAAG 9969
Query 83264 GCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTC 83323
||||||| || || || || ||||| || ||| |||||| |||||| || ||
Sbjct 9968 ACGAAGAGAGGGTGAGCGGTTTTCCCGTTCACGTCGACCTTCTCCAAGAGCTGGAATTTA 9909
Query 83324 GGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGG 83383
|| || ||||| || ||||||||||| | ||| | ||| || | |||||| |||| ||
Sbjct 9908 GGTTCAAAGCCATTGCCAGGACGGACATACTTTAAGGACGGAAGGATCTCTTCATT-TGT 9850
Query 83384 GC-GTTTTCCT 83393
| ||||||||
Sbjct 9849 ACAGTTTTCCT 9839
>seq1474
Length=917957
Score = 84.2 bits (92), Expect = 3e-11
Identities = 173/252 (69%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 83144 AACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGG 83203
|||||||| || ||||| || || || || | |||||| ||| ||| |||| | | |
Sbjct 359944 AACTTCTCAAAATTCCAAGCGACATCATTTCTGCACACAGGACTCCACACAATAAATTTG 360003
Query 83204 GGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAG 83263
|||||| ||| || | | || ||||| || || || ||| ||||||
Sbjct 360004 GGGTCGTTCATGAAGGGCATTGGCTCATCGCTCGGGAATGGAAGTTTCTCCTTGAGGAAG 360063
Query 83264 GCGAAGAGCGGATGTGCC-CTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTT 83322
| ||||| || || | ||| | ||||| || || |||||| |||||| || ||
Sbjct 360064 ACAAAGAGAGGGTGAGTGGCTTTC-CCGTTCACGTCAACCTTCTCCAAGAGCTGGAATTT 360122
Query 83323 CGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTG 83382
|| || ||||| || ||||||||||| | ||||| ||| || | |||||| |||| ||
Sbjct 360123 AGGTTCAAAGCCATTGCCAGGACGGACATACTTCAAGGACGGAAGGATCTCTTCATT-TG 360181
Query 83383 GGC-GTTTTCCT 83393
| ||||||||
Sbjct 360182 TACAGTTTTCCT 360193
>seq13173
Length=950820
Score = 82.4 bits (90), Expect = 9e-11
Identities = 154/222 (69%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202
||||||||| |||||||||| ||||| || | | ||| ||| |||| |||| |
Sbjct 453839 GAACTTCTCAAAGTTCCAGGAGACGTCATTCCTGTTCACCGGACTCCAGATGATGAATTT 453898
Query 83203 GGGGTCGCTCACGAGCGTGCTCAT-GTCGTCGCTAGGCGCCGGCAGGGCCTCTCGT--AG 83259
||| || | || | | | || |||||| || ||| ||||| | |||| | ||
Sbjct 453899 GGGATCACCCATCAAGGA-CACAGAGTCGTCACTGGGCTGAGGCAG--CTTCTCCTTGAG 453955
Query 83260 GAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAA 83319
||| | || || ||||| || | ||||||| || || |||||| | || ||
Sbjct 453956 GAACACAAACAGAGGATGGGCGTTCTCACCGTTCACTTCCAGCTTCTCCAGAAGTTGGAA 454015
Query 83320 GTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGA 83361
|| ||||||||||| || ||||||||||||| |||||| ||
Sbjct 454016 TTTTGGCTCGAAGCCATTTCCAGGACGGACGTACTTCAGAGA 454057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608144763407280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |