Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq46 125 6e-24 seq1581 122 7e-23 seq20611 113 4e-20 seq13143 104 2e-17 >seq46 Length=2207375 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||| | |||||||| || | |||||||||||| || ||||| ||||| | | Sbjct 2031669 CCACCTCTCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 2031610 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||||||| ||||| || | || || | |||||| || || Sbjct 2031609 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGGA 2031550 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | | || |||| |||||| | Sbjct 2031549 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACT 2031490 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||||||||| || | ||| ||||| || || ||||| Sbjct 2031489 TCCAAAGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2031443 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 |||||||| || | |||||||||||| || ||||| ||||| | |||||| | | || Sbjct 2030766 GAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATC 2030707 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 |||||||| ||||| || | || || | ||||||||| || | |||||||||||| Sbjct 2030706 TTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTC 2030647 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 ||| || |||||| | | | || || | |||||| || | ||| ||||| Sbjct 2030646 TTGGATTTTAGCTTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGT 2030587 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 |||||| || | ||| || ||||| || ||||| || Sbjct 2030586 CTTGCCAGTCAGCGTCTTCACAAAGATCTGCATCTT 2030551 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||| | |||||||| || | |||||||||||| || ||||| ||||| | | Sbjct 2031008 CCACCTCTCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2030949 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || |||||||| ||||| || | || || | ||||||||| || Sbjct 2030948 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGA 2030889 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || |||||| || || | | | || || | |||||| Sbjct 2030888 ATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACC 2030829 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||||||||| || | ||| ||||| || || ||||| Sbjct 2030828 TCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2030782 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||| | |||||||| || | |||||||||||| || ||||| ||||| | | Sbjct 2031441 CCACCTCTCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2031382 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || |||||||| || || ||| | || || | ||||||||| || Sbjct 2031381 AGGGTGCGTCCATCTTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 2031322 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | | || || | |||||| Sbjct 2031321 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCTATGGTGTCGCTGGGCTCAACC 2031262 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAA 21165 || | ||| ||||| || || || || || || |||| Sbjct 2031261 TCGAGGGTGATGGTTTTACCAGTCAAGGTCTTCACAA 2031225 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005 || || || || || | || || | ||| | ||||||||||| || ||||| ||||| Sbjct 2031900 TTGCCGCCACGAAGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 2031841 Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065 | |||||| | | || |||||||| || || || | || || | ||||||||| Sbjct 2031840 GACAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGA 2031781 Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 || | |||||||||||| ||| || ||| || | | | || || | |||||| Sbjct 2031780 GGAATGCCTTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCA 2031721 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||||||||| || || || || || || || ||||| Sbjct 2031720 ACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031671 >seq1581 Length=2594311 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| |||||| |||||||| || || ||||| ||||| | ||| || | | || Sbjct 1373186 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCATCT 1373245 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||||||||| || | || || ||||||||||| ||| | |||||| ||||| Sbjct 1373246 TCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 1373305 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||||| || || | | | || || | ||||| || | ||| |||||| Sbjct 1373306 TGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGATGGTC 1373365 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | ||||||||||| || ||||| Sbjct 1373366 TTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1373397 >seq20611 Length=922441 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | ||||||||||||||| || || ||||| ||||| | || || || | || Sbjct 520560 AGCACAAGATGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGACAATGTGCGGCCATCT 520619 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||||||||| ||| | || | ||||||||||| ||| | |||||| ||||| Sbjct 520620 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 520679 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | | || || | ||||| || | ||| |||||| Sbjct 520680 TGGATCTTAGCCTTGACGTTCTCAATTGTGTCGCTTGGCTCAACCTCAAGGGTGATGGTC 520739 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || | ||||||||||| || ||||| Sbjct 520740 TTACCAGTGAGGGTTTTGACAAAGATCTGCAT 520771 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| |||||| |||||||| ||||| ||||| ||||| | || || | | || || Sbjct 520334 CACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACCATCTTC 520393 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 |||||||||||| ||| | || | ||||||||||| ||| | ||||| || || Sbjct 520394 CAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCTTCTTTATCCTG 520453 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 |||||| || || | | | || |||| ||||| || | ||| |||||||| Sbjct 520454 GATCTTAGCCTTGACGTTCTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGTCTT 520513 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| || || || ||||| || || ||||| Sbjct 520514 GCCTGTCAAGGTCTTGACGAAGATCTGCAT 520543 >seq13143 Length=1991197 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005 || ||||| || || | || || | ||||| ||||||||||| || ||||| ||||| Sbjct 1626617 TTGCCCCCACGAAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 1626558 Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065 | ||| || | | || || ||||| ||||| || | || || | ||||||||| Sbjct 1626557 GACAGCGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGA 1626498 Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 || | |||||||||||| |||||| ||||| | | | || || | |||||| Sbjct 1626497 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCA 1626438 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||||||||| || | ||||| ||||| || ||||| Sbjct 1626437 ACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 1626388 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||| | || || | ||| | ||||| ||||| || ||||| || || | | Sbjct 1624820 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGAC 1624761 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || |||| ||| ||||| ||| | || || | ||||||||| || Sbjct 1624760 AGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGG 1624701 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||| || ||| || | | | || || | |||||| Sbjct 1624700 ATGCCTTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAACC 1624641 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| ||||||||||| || | ||| ||||| || || ||||| || Sbjct 1624640 TCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATCTT 1624591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421818256094312