Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq1581 120 2e-22
seq46 118 7e-22
seq13143 105 4e-18
seq20611 98.7 6e-16
>seq1581
Length=2594311
Score = 120 bits (132), Expect = 2e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||||||||| || || || |||||||| ||||||||||| ||||| || | ||
Sbjct 1373185 CAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCATC 1373244
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| ||| ||||| ||||| || |||| ||||||||| ||| | || || |||||
Sbjct 1373245 TTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 1373304
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
|||||| ||| | | | || | ||| | | ||||| || | ||||||||
Sbjct 1373305 CTGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGATGGT 1373364
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| ||||| ||||| |||||||||||||||
Sbjct 1373365 CTTGCCAGTGAGGGTTTTGACAAAGATCTGCATC 1373398
>seq46
Length=2207375
Score = 118 bits (130), Expect = 7e-22
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | ||| || ||||| ||||||||||||||||| || | ||
Sbjct 2030765 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 2030706
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||| ||||| || || ||||||||||| || | || ||||||||
Sbjct 2030705 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCT 2030646
Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
|| ||| ||||| | || | || | ||| | | || || || | ||||||||
Sbjct 2030645 TGGAT-TTTAGCTTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGT 2030587
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| || || || ||||||||||||||||||
Sbjct 2030586 CTTGCCAGTCAGCGTCTTCACAAAGATCTGCATC 2030553
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | ||| || ||||| ||||||||||||||||| || | ||
Sbjct 2030993 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 2030934
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||| ||||| || || ||||||||||| || | || ||||| ||
Sbjct 2030933 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 2030874
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | ||| | | || || || | ||||||||
Sbjct 2030873 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 2030814
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| || || || || || |||||||||||
Sbjct 2030813 TTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2030782
Score = 95.1 bits (104), Expect = 8e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | ||| || ||||| ||||||||||| ||||| || | ||
Sbjct 2031654 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCC 2031595
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||| ||||| || || |||||||| || || | || ||||||||
Sbjct 2031594 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 2031535
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | || || |||| ||||||||
Sbjct 2031534 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAAAGTGATGGTC 2031475
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| || || || || || |||||||||||
Sbjct 2031474 TTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2031443
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | ||| || || || | || || ||||| |||||||||||||||
Sbjct 2031897 CCGCCACGAAGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2031838
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || |||| |||||| || ||||| || || ||||||||||| ||
Sbjct 2031837 AGGGTGCGTCCATCTTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGA 2031778
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||||| || ||| ||||| | || | || | ||| | | || ||
Sbjct 2031777 ATGCCTTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAAC 2031719
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| ||||| || | || ||||| |||||||||||
Sbjct 2031718 CTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031671
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|||||||| ||||||||||||||||| || | || |||||||| ||||| |||||
Sbjct 2031200 TCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAG 2031141
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| | ||||||||||| || | || ||||| || ||||| ||| | |
Sbjct 2031140 ATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTC 2031081
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| | | || || || | |||||||| ||||| || | || |||||
Sbjct 2031080 TCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACG 2031021
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 2031020 AAGATCTGCAT 2031010
Score = 86.0 bits (94), Expect = 4e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | ||| || ||||| ||||||||||||||||| || | ||
Sbjct 2031426 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 2031367
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| |||||| || || || || || ||||||||||| || | || ||||||||
Sbjct 2031366 TCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 2031307
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | |||| | ||| | | || || || | |||||||||
Sbjct 2031306 TGGATCTTGGCCTTGACGTTCTCTATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTT 2031247
Query 34358 TTGCCGGTGAGAGTTTTCACAA 34379
|| || || | || |||||||
Sbjct 2031246 TTACCAGTCAAGGTCTTCACAA 2031225
>seq13143
Length=1991197
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| |||||||||||||||||| || | || || | ||||||||| |||||
Sbjct 1626578 TCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAAG 1626519
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||||||||| || | || |||||||| ||||| ||| | |
Sbjct 1626518 ATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTC 1626459
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| | | || || || | |||||||| ||||| || || |||||||||
Sbjct 1626458 TCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACA 1626399
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 1626398 AAGATCTGCAT 1626388
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| |||||||| || |||||| || | || |||||||||||||| || ||
Sbjct 1624785 TTCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAA 1624726
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316
|| || ||||||||||| || | || |||||||| || ||| ||||| | |
Sbjct 1624725 GATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGAT-TTTAGCTTTGACGT 1624667
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| || | ||| | | || || || | |||||||| ||||| || || || || |
Sbjct 1624666 TCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGA 1624607
Query 34377 CAAAGATCTGCATC 34390
| ||||||||||||
Sbjct 1624606 CGAAGATCTGCATC 1624593
>seq20611
Length=922441
Score = 98.7 bits (108), Expect = 6e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
|||||| || || ||||| |||||||| ||||||||||| |||| ||| | ||
Sbjct 520559 CAGCACAAGATGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGACAATGTGCGGCCATC 520618
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| ||| ||||| || || || | || ||||||||| ||| | || || |||||
Sbjct 520619 TTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 520678
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | | | || | ||| | | || || || | ||||||||
Sbjct 520679 CTGGATCTTAGCCTTGACGTTCTCAATTGTGTCGCTTGGCTCAACCTCAAGGGTGATGGT 520738
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| || ||||| ||||| |||||||||||||||
Sbjct 520739 CTTACCAGTGAGGGTTTTGACAAAGATCTGCATC 520772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322734632265920
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