Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1581 107 2e-18
seq20611 102 8e-17
>seq1581
Length=2594311
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| || || || ||||| ||||| |||||||| |||
Sbjct 1373201 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCATCTTCCAGCTGTTTGCCA 1373260
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| ||||||| | ||||| || || || |||||||||||||| ||| ||| ||
Sbjct 1373261 GCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTTTGCCTTG 1373320
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | |||||| | ||||| ||||||| ||| | |||||||| || | |||
Sbjct 1373321 ACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTT 1373380
Query 139748 TTTACGAATATTTGCAT 139764
|| || || || |||||
Sbjct 1373381 TTGACAAAGATCTGCAT 1373397
>seq20611
Length=922441
Score = 102 bits (112), Expect = 8e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608
|||||| || | || | || ||||||||||| ||||| || || || |||||
Sbjct 520328 ACGCAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACC 520387
Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668
||||| |||||||| || ||| |||||| | ||||| || || || || ||||||||
Sbjct 520388 ATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCTTCTTT 520447
Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
|| ||| || || | | || | ||||| | ||||| ||||||| ||| |
Sbjct 520448 ATCCTGGATCTTAGCCTTGACGTTCTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGAT 520507
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||||| ||||| || || ||||| || |||||
Sbjct 520508 GGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 520543
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| || || || ||||| ||||| |||||||| ||
Sbjct 520575 GTGGACTCTTTCTGGATGTTGTAGTCAGACAATGTGCGGCCATCTTCCAGCTGTTTGCCG 520634
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||||| | ||||| || || || |||||||||||||| ||| || ||
Sbjct 520635 GCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTTAGCCTTG 520694
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||||| | ||||| ||||||| ||| | ||||| || || | |||
Sbjct 520695 ACGTTCTCAATTGTGTCGCTTGGCTCAACCTCAAGGGTGATGGTCTTACCAGTGAGGGTT 520754
Query 139748 TTTACGAATATTTGCAT 139764
|| || || || |||||
Sbjct 520755 TTGACAAAGATCTGCAT 520771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495532703054400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |