Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq16819 123 4e-23
seq6006 120 4e-22
seq85036 118 2e-21
seq19301 118 2e-21
seq3398 118 2e-21
seq11759 114 2e-20
seq11199 111 2e-19
>seq16819
Length=1945512
Score = 123 bits (136), Expect = 4e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| ||||| || || ||||| ||||| || |||||||| ||||| || || | ||| |
Sbjct 739164 CCTCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCT 739105
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| || || || ||||| ||||||||||||||||||||||| || || ||||| |
Sbjct 739104 TTAGCCAGAAAATAGAAGCAAAAGACCCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 739045
Query 50102 CAACAAGTCTCTCTCC 50117
| || | |||||| ||
Sbjct 739044 CCACCACTCTCTCCCC 739029
>seq6006
Length=139621
Score = 120 bits (132), Expect = 4e-22
Identities = 108/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| ||||| || || ||||| ||||| || |||||||| ||||| || || | ||| |
Sbjct 86163 CCTCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCT 86222
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| || || || ||||| ||||| ||||||||||||||||| || || ||||| |
Sbjct 86223 TTAGCCAGAAAATAGAAGCAAAAGACCCGGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 86282
Query 50102 CAACAAGTCTCTCTCC 50117
| || | |||||| ||
Sbjct 86283 CCACCACTCTCTCCCC 86298
>seq85036
Length=2202
Score = 118 bits (130), Expect = 2e-21
Identities = 115/148 (78%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998
||||| ||||| ||||||||||| ||||| || || ||| |||||||| | ||| ||
Sbjct 1119 ACTCGCTTCATGAAGAGATCAGGGATCCAGAGGGCGTAAAACAGATCTCTAGCTCTCTGT 1060
Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058
||||| || || || ||||||||||| || ||||| | | ||| ||| ||||||| ||
Sbjct 1059 TCCTCTTTACCAGTGTTCTTTTTAAGCTCTAGGAAGTCGAAAATGTCAAAATGCCAGGGC 1000
Query 80059 TCCAAGTATATGGCCATAACTCCCGGTC 80086
|||| ||| ||||| | | |||| ||||
Sbjct 999 TCCAGGTACATGGCAAAAGCTCCTGGTC 972
>seq19301
Length=1192634
Score = 118 bits (130), Expect = 2e-21
Identities = 115/148 (78%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998
||||| ||||| ||||||||||| ||||| || || ||| |||||||| | ||| ||
Sbjct 386054 ACTCGCTTCATGAAGAGATCAGGGATCCAGAGGGCATAAAACAGATCTCTAGCTCTCTGT 386113
Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058
||||| || || |||||||||||||| || ||||| | | ||| ||| ||||||| ||
Sbjct 386114 TCCTCTTTACCAGTATTCTTTTTAAGCTCTAGGAAGTCAAAAATGTCAAAATGCCAGGGC 386173
Query 80059 TCCAAGTATATGGCCATAACTCCCGGTC 80086
|||| ||| || || | | |||| ||||
Sbjct 386174 TCCAGGTACATAGCAAAAGCTCCTGGTC 386201
Score = 105 bits (116), Expect = 1e-17
Identities = 127/170 (75%), Gaps = 2/170 (1%)
Strand=Plus/Plus
Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844
|||| || ||||| ||||| || || |||||| ||| | || || || || ||||| |
Sbjct 380616 TCCAGCCATAGAAGTGCATGCTGGTCAGTTTGCCATAGTTGGGTTCAGCGATGTGGATGT 380675
Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904
| | || || || || || ||||||||||| |||||||||||||| |||| ||| ||||
Sbjct 380676 TGAGGGACTGGCTCTGGTCAATGAAGGCTCCTCTGTCTGCAGCCATCTTTAAGATGGTCT 380735
Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 78953
|||| | || ||||| | || ||||| | ||| ||| | || |||||
Sbjct 380736 TTTGAGAGATCTCCCACACCGTCTTATACAGCTC-CTTCAGGTCATCTGG 380784
>seq3398
Length=854497
Score = 118 bits (130), Expect = 2e-21
Identities = 115/148 (78%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998
||||| ||||| ||||||||||| ||||| || || ||| |||||||| | ||| ||
Sbjct 22325 ACTCGCTTCATGAAGAGATCAGGGATCCAGAGGGCGTAAAACAGATCTCTAGCTCTCTGT 22266
Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058
||||| || || || ||||||||||| || ||||| | | ||| ||| ||||||| ||
Sbjct 22265 TCCTCTTTACCAGTGTTCTTTTTAAGCTCTAGGAAGTCGAAAATGTCAAAATGCCAGGGC 22206
Query 80059 TCCAAGTATATGGCCATAACTCCCGGTC 80086
|||| ||| ||||| | | |||| ||||
Sbjct 22205 TCCAGGTACATGGCAAAAGCTCCTGGTC 22178
Score = 111 bits (122), Expect = 2e-19
Identities = 126/169 (75%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844
|||| || ||||| ||||| || || |||||| ||| | || || || || ||||| |
Sbjct 30534 TCCAGCCATAGAAGTGCATGCTGGTCAGTTTGCCATAGTTGGGTTCAGCAATGTGGATGT 30475
Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904
| | || || || || || ||||||||||| |||||||||||||| |||| ||| ||||
Sbjct 30474 TGAGGGACTGGCTCTGGTCAATGAAGGCTCCTCTGTCTGCAGCCATCTTTAAGATGGTCT 30415
Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 78953
|||| | || ||||| | ||| ||||| | | ||| | || |||||
Sbjct 30414 TTTGCGAGATCTCCCACACAGTCTTATACAGTTCCTTCAGGTCATCTGG 30366
>seq11759
Length=1730004
Score = 114 bits (126), Expect = 2e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| ||||| || || ||||| ||||| | |||||||||||||| ||||| | || |
Sbjct 147487 CCTCATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCGCTTTTCT 147546
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| | ||| | |||| |||||||| ||||| |||||||| ||||||||||| ||||| |
Sbjct 147547 TCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCTACTGCTGCAAATG 147606
Query 50102 CAACAAGTCTCTCTCC 50117
| || | || ||||||
Sbjct 147607 CTACTAATCGCTCTCC 147622
Score = 86.0 bits (94), Expect = 9e-12
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 50452 ATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATG 50511
|||| || || || |||||||| ||||| |||| || | ||| ||||| |||||||||
Sbjct 149176 ATATTCACCTCCTCAACTGTCCAGAATGAAGCCTGAGCTTGTTTGTACATTTTCCAGATG 149235
Query 50512 TCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553
||| |||| || || || ||||| ||||||| ||||| |||
Sbjct 149236 TCAGGATACTGAATAGGAAAAATGACAAATCGCTTTGGGTTT 149277
>seq11199
Length=1679328
Score = 111 bits (122), Expect = 2e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| ||||| || || ||||| ||||| | |||||||||||||| ||||| | || |
Sbjct 643754 CCTCATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCTCTTTTCT 643695
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| | ||| | |||| |||||||| ||||| |||||||| ||||| ||||| ||||| |
Sbjct 643694 TCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCCACTGCTGCAAATG 643635
Query 50102 CAACAAGTCTCTCTCC 50117
| || | || ||||||
Sbjct 643634 CTACTAATCGCTCTCC 643619
Score = 89.7 bits (98), Expect = 7e-13
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 50452 ATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATG 50511
|||| || || || |||||||| ||||| |||| || | ||| ||||| |||||||||
Sbjct 641027 ATATTCACCTCCTCAACTGTCCAGAATGAAGCCTGAGCTTGTTTGTACATTTTCCAGATG 640968
Query 50512 TCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553
||| |||| || || |||||||| ||||||| ||||| |||
Sbjct 640967 TCAGGATACTGAATAGGGAAAATGACAAATCGTTTTGGGTTT 640926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 717499516158480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |