Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq20611 96.9 3e-15 >seq20611 Length=922441 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 |||||| | || | | ||| | ||| | |||| ||| || || | ||||| || || Sbjct 520544 GCCTCCCCTGAGACGCAGCACAAGATGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGA 520603 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 |||||| || | || |||| |||||||||||||| ||||| | ||| || || | || Sbjct 520604 CAATGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 520663 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||||| || |||| | ||||| | ||| |||||||| | ||| || Sbjct 520664 AATGCCTTCTTTGTCCTGGATCTTAGCCTTGACGTTCTCAATTGTGTCGCTTGGCTCAAC 520723 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || || || || ||||| ||||| || ||||| Sbjct 520724 CTCAAGGGTGATGGTCTTACCAGTGAGGGTTTTGACAAAGATCTGCAT 520771 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 ||||||| ||| | ||| ||| ||||| | ||||| || |||||||| || | || Sbjct 520332 AACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACCATCT 520391 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 |||| |||||||||||||| ||||| | ||| || || | || | ||||||||| || Sbjct 520392 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCTTCTTTATCC 520451 Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077 |||| | ||||| | ||| ||||| | | ||| || || | || || || Sbjct 520452 TGGATCTTAGCCTTGACGTTCTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGTC 520511 Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || | || || || || || ||||| Sbjct 520512 TTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 520543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380971355033556