Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq19301 102 1e-16 seq3398 98.7 1e-15 seq77944 91.5 2e-13 >seq19301 Length=1192634 Score = 102 bits (112), Expect = 1e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 |||||| | |||||| | | ||||| |||||| || || || ||||| ||||||||| Sbjct 383291 CTGTGGTATGCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTCTACAAG 383232 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 ||| || || ||||| |||||||| | || ||||||||||||| || || || Sbjct 383231 GATGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGCAGTAACTTG 383172 Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322 ||||| || |||||||||||| || Sbjct 383171 TGCACAGAGATTGTAGAGTACACC 383148 >seq3398 Length=854497 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 |||||| | |||||| | | ||||| |||||| || || || ||||| || |||||| Sbjct 23402 CTGTGGTATGCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAG 23461 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 ||| || || ||||| |||||||| | || |||||||||| || || || || Sbjct 23462 GATGCCTGCAACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTG 23521 Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322 ||||| ||||||||||||||| || Sbjct 23522 TGCACAGAAATTGTAGAGTACACC 23545 >seq77944 Length=846 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 97188 GCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTG 97247 |||||| | | ||||| |||||| || || || ||||| || ||||||||| || Sbjct 2 GCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTGC 61 Query 97248 AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAA 97307 || ||||| |||||||| | || |||||||||| || || || ||||||| ||| Sbjct 62 AACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGAA 121 Query 97308 ATTGTAGAGTACGCC 97322 |||||||||||| || Sbjct 122 ATTGTAGAGTACACC 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740265507070320