Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq19301 102 1e-16
seq3398 98.7 1e-15
seq77944 91.5 2e-13
>seq19301
Length=1192634
Score = 102 bits (112), Expect = 1e-16
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238
|||||| | |||||| | | ||||| |||||| || || || ||||| |||||||||
Sbjct 383291 CTGTGGTATGCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTCTACAAG 383232
Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298
||| || || ||||| |||||||| | || ||||||||||||| || || ||
Sbjct 383231 GATGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGCAGTAACTTG 383172
Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322
||||| || |||||||||||| ||
Sbjct 383171 TGCACAGAGATTGTAGAGTACACC 383148
>seq3398
Length=854497
Score = 98.7 bits (108), Expect = 1e-15
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238
|||||| | |||||| | | ||||| |||||| || || || ||||| || ||||||
Sbjct 23402 CTGTGGTATGCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAG 23461
Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298
||| || || ||||| |||||||| | || |||||||||| || || || ||
Sbjct 23462 GATGCCTGCAACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTG 23521
Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322
||||| ||||||||||||||| ||
Sbjct 23522 TGCACAGAAATTGTAGAGTACACC 23545
>seq77944
Length=846
Score = 91.5 bits (100), Expect = 2e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 97188 GCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTG 97247
|||||| | | ||||| |||||| || || || ||||| || ||||||||| ||
Sbjct 2 GCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTGC 61
Query 97248 AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAA 97307
|| ||||| |||||||| | || |||||||||| || || || ||||||| |||
Sbjct 62 AACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGAA 121
Query 97308 ATTGTAGAGTACGCC 97322
|||||||||||| ||
Sbjct 122 ATTGTAGAGTACACC 136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740265507070320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |