Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq13143 91.5 1e-13
seq1581 91.5 1e-13
>seq13143
Length=1991197
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||| | | || | ||| |||||||| || || || |||||||||||
Sbjct 1624820 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGAC 1624761
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | | | ||||| || || |||||||| | |||| ||| || ||||| ||
Sbjct 1624760 AGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGG 1624701
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| ||||| ||||| ||||| ||| || || | || ||||| ||||| || ||
Sbjct 1624700 ATGCCTTCCTTGTCTTGGATTTTAGCT-TTGACGTTCTCAATGGTGTCGCTGGGCTCAAC 1624642
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367
|| | ||| ||||| || || ||||| || || || || || ||||| |||
Sbjct 1624641 CTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATCTTT 1624590
>seq1581
Length=2594311
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/229 (70%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
||| | |||||| ||||| || |||||||| || || | | | ||||| | ||
Sbjct 1373194 ATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCATCTTCCAGCTG 1373253
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TT 15278
|||||||||| | |||| | || ||||| ||||| ||||||||||| || ||
Sbjct 1373254 TTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTT 1373313
Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338
||| ||| || | || ||||| ||||| || || || | ||| ||||| || || |
Sbjct 1373314 TGC-CTTGACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGATGGTCTTGCCAG 1373372
Query 15339 TCAGAGTTTTTACAAAAATTTGCATATTTGAA-AATAAAATTTTAATAC 15386
| || ||||| ||||| || ||||| | | || || ||||| | ||||
Sbjct 1373373 TGAGGGTTTTGACAAAGATCTGCATCTATAAACAAAAAAATATATATAC 1373421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361800994596762
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |