Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq7720 147 3e-30
seq9107 134 2e-26
seq9617 120 4e-22
seq20662 118 2e-21
seq5998 118 2e-21
seq19268 116 5e-21
>seq7720
Length=2841229
Score = 147 bits (162), Expect = 3e-30
Identities = 198/276 (72%), Gaps = 0/276 (0%)
Strand=Plus/Plus
Query 8699 CCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCAAACCCC 8758
|||||||| || | || || | ||| | || ||| | ||||| ||| |||| |||
Sbjct 1872897 CCTTTGACATTATTGCAAACCAATTTCTGCAGAGAAGCAGTGTTGACAATCTCAAAGCCC 1872956
Query 8759 ACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATG 8818
|| | || || || ||||| ||||||||||| | ||||| |||||| || ||||
Sbjct 1872957 ACTTTGCCACCAAAAGTGCTCGGTTTCCAGTACTCAGGGGAACAGATGGGATTTCCCATA 1873016
Query 8819 AGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTG 8878
|| ||||||||||| | || || |||| || | ||| |||| || ||||||||||||
Sbjct 1873017 AGTCCTTTGAGGGAGTAGGGGGCACCCATTTCCACCATGGTCTCCCCAAAGATGGCGTTG 1873076
Query 8879 GGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAA 8938
| | |||||| || |||| || || || || ||||||||||| || | | |||||
Sbjct 1873077 GTCCTGGGCTTCTCAACCAGCAAGCCAGTATAAAACTCCACAGCATCCACATGCCCGTAC 1873136
Query 8939 AGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCT 8974
| | ||||| ||||| || ||||||||||||
Sbjct 1873137 AACTCTTCAAGTTCAGCAGCCATCTCCTTTTCTCCT 1873172
Score = 138 bits (152), Expect = 2e-27
Identities = 183/254 (72%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669
|| || |||| |||||| || |||||||||||||| |||||| ||| || |||||
Sbjct 1874073 TCACCAATAAGGATGAGCCGTGTGGTCTGAAACAGCCTCTCGTCATCCCAGTCAGGATGC 1874132
Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729
|| || || | ||| ||||||| ||||||||| | |||||||| ||||| ||||||
Sbjct 1874133 TCCTTCTTTAGTATATCACACACTCGGTTGTGTTCACGCAGCCAGATGGTAGCATACATC 1874192
Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789
||||| || || ||||| ||||| ||||| ||||| || || | || | || ||
Sbjct 1874193 ATGAGTCCTGGAACCAGTCCAAAGGCCTCATGACCCACGGCAAAGCGACGAGACTCAGGT 1874252
Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCA 9849
|| | ||||| ||| ||||| || || || || |||| | || ||||| | |||
Sbjct 1874253 ACATGAGGAGGGTAGTGCATGTCTACTTGAACCTCACTGACTGTCGGAGGATAAACCTCA 1874312
Query 9850 CCGTCAATAATCTG 9863
|| || | || |||
Sbjct 1874313 CCATCCAGAACCTG 1874326
Score = 89.7 bits (98), Expect = 7e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346
|||||| ||| || | || ||||| |||||||| || || ||||| || | | | |
Sbjct 1875230 TCACCTGCGACTCCCATTGGTGTTGGGCAATCGTGTGGGACAGGAGGCAGTGTGCGAGTG 1875289
Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406
|| ||||||||||| ||| | |||||||||||| ||| | ||||| || ||| | |
Sbjct 1875290 TAGTAGGAGAGATTAGAGTAGGCTTCCCAGCTTTTGTAACCATAGTCAGCATTGAATAAA 1875349
Query 10407 GGAGGGCTGTCAATCAAATCGG 10428
|| ||||| ||||||| || ||
Sbjct 1875350 GGTGGGCTATCAATCAGATGGG 1875371
>seq9107
Length=1685290
Score = 134 bits (148), Expect = 2e-26
Identities = 196/277 (71%), Gaps = 0/277 (0%)
Strand=Plus/Minus
Query 8698 CCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCAAACCC 8757
||||||||| || | || || | ||| | || ||| | ||||| ||| |||| ||
Sbjct 1329130 CCCTTTGACATTATTGCAAACCAATTTCTGCAGAGAGGCAGTATTGACAATCTCAAAGCC 1329071
Query 8758 CACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCAT 8817
||| | || || ||||| || ||||||||||| | ||||| |||||| || ||||
Sbjct 1329070 CACTTTGCCACCAAAGGTACTTGGTTTCCAGTACTCGGGGGAACAGATGGGATTTCCCAT 1329011
Query 8818 GAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTT 8877
|| ||||||||||| | || || |||| || | ||| |||| || ||||||| |||
Sbjct 1329010 AAGTCCTTTGAGGGAGTAGGGGGCACCCATTTCCACCATGGTCTCCCCAAAGATGGTGTT 1328951
Query 8878 GGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTA 8937
|| | |||||| || |||| | || | || | ||||||||| || | || |||||
Sbjct 1328950 GGTCCTGGGCTTCTCAACCAGCAGCCCAGCATAAAGCTCCACAGCATCCACATCCCCGTA 1328891
Query 8938 AAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCT 8974
| | ||||| ||||| || ||||||||||||
Sbjct 1328890 CAACTCTTCAAGTTCAGCAGCCATCTCCTTTTCTCCT 1328854
Score = 120 bits (132), Expect = 4e-22
Identities = 179/254 (70%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669
|| || |||| |||||| || | |||||||||||| |||||| ||| || |||||
Sbjct 1327944 TCACCAATAAGGATGAGCCGTGCGGTCTGAAACAGCCTCTCGTCATCCCAGTCAGGATGC 1327885
Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729
|| | || || | ||| ||||||| ||||||||| | ||||| || || || ||||||
Sbjct 1327884 TCCTGCTTTAGTATATCACACACTCGGTTGTGTTCACGCAGCCATATGGTGGCATACATC 1327825
Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789
||||| || || ||||| ||||| || || ||||| || || | || || ||
Sbjct 1327824 ATGAGTCCGGGAACCAGTCCAAAGGCTTCGTGACCAACGGCAAAGCGACGGGACTCAGGT 1327765
Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCA 9849
|| | ||||| ||| ||||| || || || || |||| | || ||||| | |||
Sbjct 1327764 ACATGAGGAGGGTAGTGCATGTCTACTTGAACCTCACTGACTGTCGGAGGATAAACCTCA 1327705
Query 9850 CCGTCAATAATCTG 9863
|| || | || |||
Sbjct 1327704 CCATCCAGAACCTG 1327691
Score = 104 bits (114), Expect = 3e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346
|||||| ||| || | || |||||||||||||| || || ||||| || | | | |
Sbjct 1326771 TCACCTGCGACTCCCATTGGTGTTGGACAATCGTGCGGGACAGGAGGCAGCGTGCGAGTG 1326712
Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406
|| ||||||||||| ||| | |||||||||||| ||| | ||||| || ||| | ||
Sbjct 1326711 TAGTAGGAGAGATTTGAGTAGGCTTCCCAGCTTTTGTAACCATAGTCAGCATTGAATATA 1326652
Query 10407 GGAGGGCTGTCAATCAAATCGG 10428
|||||||| ||||||| || ||
Sbjct 1326651 GGAGGGCTATCAATCAGATGGG 1326630
>seq9617
Length=2863312
Score = 120 bits (132), Expect = 4e-22
Identities = 170/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 9613 CCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCT 9672
|| ||||| ||||| | |||||||||||||| || || || | ||| |||||||||
Sbjct 2728179 CCTATAATAATGAGCCTGGTGGTCTGAAACAGCTGCTCATCCCCCCAGGTAGGATGTTCT 2728238
Query 9673 CGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATG 9732
||||||| | ||| ||||| | |||||| || | ||||| | || |||||||| ||
Sbjct 2728239 TGTTTCAGGATATCACACACACGGTTGTGCTCACGCAGCCACAAGGTGGCGTACATACTG 2728298
Query 9733 AGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACT 9792
||||| |||| ||||||||| | ||||| || | ||||| || | || ||
Sbjct 2728299 AGACCCGGCAGCAGGCCAAACACTTCTTGCCCAATGGCCAGCTGCTGCTCCGGTGGGACA 2728358
Query 9793 TCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACC 9851
|| || ||| |||| | ||| | ||||| || | |||||||||||| |||||
Sbjct 2728359 GACGGCGGGTAGCTCATTTTGACCGGTGCATCTAGTACTGTGGGGGGATACATCTCACC 2728417
Score = 89.7 bits (98), Expect = 7e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 8765 CCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8824
|| || || || ||||| |||||||| | |||||||| | || |||||||||||
Sbjct 2720965 CCCCCAAATGTACTGGGCTTCCAGTACTCAGGGGAGCAAACAGGATTTCCCATGAGGCCT 2721024
Query 8825 TTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8884
|| |||||||| || ||||||| || | ||||| ||||| || || || | ||
Sbjct 2721025 TTTAGGGAAAATGGGGCCCCCATTTCCACCATGCTTTCACCAAATATCGCACCAGATCGT 2721084
Query 8885 GGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAGGGCC 8944
| ||| || | ||| | | | ||| ||||||| ||| || || || || || || ||
Sbjct 2721085 GTCTTCTCTAGCAAAAGAGCTGGGTAGAACTCCAGAGCATCAATATCACCATACAGTTCC 2721144
Query 8945 CTGAGTTCGGCAGCGATTTCCTTTTCTCCTGT 8976
||||| ||| || || | |||||||||
Sbjct 2721145 TCTAGTTCTTTAGCCATCTCTTCTTCTCCTGT 2721176
>seq20662
Length=778419
Score = 118 bits (130), Expect = 2e-21
Identities = 178/253 (70%), Gaps = 0/253 (0%)
Strand=Plus/Plus
Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669
|| || || | |||||| |||||||| || || | ||||| ||| || |||||
Sbjct 621607 TCACCAATCAGGATGAGACGAGTGGTTTGGAAGATCCTCTCGTCGTCCCAGTCGGGATGC 621666
Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729
||| | |||| | ||| || || | |||||| || | ||||| || ||||| ||||||
Sbjct 621667 TCTTGCTTCATGATATCACAGACACGGTTGTGCTCACGAAGCCAAATGGTAGCATACATC 621726
Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789
|| | ||| || ||||| || || |||| || || ||||| | | | | ||| ||
Sbjct 621727 ATCAAACCTGGAACCAGACCGAAGACCTCATGGCCCACAGCAAATCTCTGTTCTTCTGGG 621786
Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCA 9849
| | ||||||||| ||| | |||||||||||| || ||| | || ||||||| |||
Sbjct 621787 ATATGAGGAGGATAGTGCATCTCCACCTGGACATCCTTCACCAACGGAGGATACACCTCA 621846
Query 9850 CCGTCAATAATCT 9862
|| || | || ||
Sbjct 621847 CCATCCACAACCT 621859
Score = 98.7 bits (108), Expect = 1e-15
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 8751 CAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGT 8810
|||| ||||| | || || || ||||| || ||||||| | || || || | | |
Sbjct 620422 CAAATCCCACTTTCCCACCAAATGTGCTCGGCATCCAGTATTCAGGAGAACAAACAGCAT 620481
Query 8811 TCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGA 8870
| ||||||| |||||||| || | || || |||| ||| | || |||| || || |
Sbjct 620482 TTCCCATGAGACCTTTGAGAGAGTAGGGGGCTCCCATCTCTACCATAGTCTCCCCAAACA 620541
Query 8871 TGGCGTTGGGACGGGGCTTTTCCACCAAGAAT-CCGGTGTACAACTCCACAGCCTCGATG 8929
|||||||| | ||| || ||||| ||||| || | |||| ||| || || || |||
Sbjct 620542 CAGCGTTGGGTCTGGGTTTCTCCAC-AAGAAGGCCAGGATACAGCTCAACCGCGTCTATG 620600
Query 8930 TCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTGTTTTA 8980
| ||||| || | | | |||||| || | ||||| ||||||||||||
Sbjct 620601 TGACCGTACAGCTGCTTCATTTCGGCTGCCAGCTCCTTGTCTCCTGTTTTA 620651
>seq5998
Length=1230033
Score = 118 bits (130), Expect = 2e-21
Identities = 178/253 (70%), Gaps = 0/253 (0%)
Strand=Plus/Minus
Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669
|| || || | |||||| |||||||| || || | | ||||| ||| || |||||
Sbjct 827363 TCACCAATCAGGATGAGACGAGTGGTTTGGAAGATTCTCTCGTCGTCCCAGTCGGGATGC 827304
Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729
||| | |||| | ||| || || | |||||| || | ||||| || | || ||||||
Sbjct 827303 TCTTGCTTCATGATATCACAGACGCGGTTGTGCTCACGAAGCCAAATGGAGGCATACATC 827244
Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789
|| | ||| || ||||| || || ||||| || || ||||| | | | | || ||
Sbjct 827243 ATCAAACCTGGAACCAGACCGAAGGCCTCATGGCCCACAGCAAATCTCTGTTCCTCTGGG 827184
Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCA 9849
|| | ||||||||| ||| | |||||||||||| || ||| | || ||||||| |||
Sbjct 827183 ACGTGAGGAGGATAGTGCATCTCCACCTGGACATCCTTCACCAATGGAGGATACACCTCA 827124
Query 9850 CCGTCAATAATCT 9862
|| || | || ||
Sbjct 827123 CCATCCACAACCT 827111
Score = 116 bits (128), Expect = 5e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 8751 CAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGT 8810
|||| ||||| | || || || ||||| || ||||||| | || || || || | |
Sbjct 828502 CAAATCCCACTTTCCCACCAAATGTGCTAGGCATCCAGTATTCAGGAGAACAAATAGCAT 828443
Query 8811 TCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGA 8870
| |||||||||||||||| || | || || |||| ||| | || |||| || || |
Sbjct 828442 TTCCCATGAGGCCTTTGAGAGAGTAGGGCGCTCCCATCTCCACCATAGTCTCCCCAAACA 828383
Query 8871 TGGCGTTGGGACGGGGCTTTTCCACCAAGAAT-CCGGTGTACAACTCCACAGCCTCGATG 8929
|||||||| ||||| || ||||| ||||| || || |||| ||| || || || |||
Sbjct 828382 CAGCGTTGGGTCGGGGTTTCTCCAC-AAGAAGGCCAGTATACAGCTCAACCGCATCTATG 828324
Query 8930 TCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTGTTTTA 8980
| ||||| || | | | |||||| || | ||||| ||||||||||||
Sbjct 828323 TGACCGTACAGCTGCATCATTTCGGCTGCCAGCTCCTTGTCTCCTGTTTTA 828273
>seq19268
Length=1198490
Score = 116 bits (128), Expect = 5e-21
Identities = 169/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 9613 CCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCT 9672
|| ||||| ||||| | |||||||||||||| || || || | ||| ||||||||||
Sbjct 414420 CCTATAATAATGAGCCTGGTGGTCTGAAACAGCTGCTCATCCCCCCAGGTTGGATGTTCT 414361
Query 9673 CGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATG 9732
||||||| | ||| ||||| | |||||| || | ||||| | || ||||||| ||
Sbjct 414360 TGTTTCAGGATATCACACACACGGTTGTGCTCACGCAGCCACAAGGTGGCGTACAAACTG 414301
Query 9733 AGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACT 9792
||||| |||| ||| ||||| | ||||| || | ||||| ||| | | || ||
Sbjct 414300 AGACCCGGCAGCAGTCCAAACACTTCTTGCCCAATGGCCAGCTGCAGCTCTGGCGGGACA 414241
Query 9793 TCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACC 9851
|| || ||| |||| | ||| | ||||| || | |||||| || || |||||
Sbjct 414240 GACGGTGGGTAGTTCATTTTGACCGGTGCATCTAGCACTGTGGGGGGGTATATCTCACC 414182
Score = 89.7 bits (98), Expect = 7e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 8765 CCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8824
|| || || || ||||| |||||||| | |||||||| || || |||||||||||
Sbjct 434192 CCCCCAAATGTACTGGGCTTCCAGTACTCAGGGGAGCAAATAGGATTTCCCATGAGGCCT 434133
Query 8825 TTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8884
|| |||||||| || ||||||| || | ||||| ||||| || || | || ||
Sbjct 434132 TTTAGGGAAAATGGGGCCCCCATTTCCACCATGCTTTCACCAAATATCACACCAGGTCGT 434073
Query 8885 GGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAGGGCC 8944
| ||| || | ||| | | | ||| ||||||| ||| || || | || || || |
Sbjct 434072 GTCTTCTCTAGCAAAAGAGCTGGGTAGAACTCCAGAGCATCAATATGACCATACAGTTTC 434013
Query 8945 CTGAGTTCGGCAGCGATTTCCTTTTCTCCTGT 8976
||||| ||| || || |||||||||||
Sbjct 434012 TCTAGTTCTTTAGCCATCTCTTTTTCTCCTGT 433981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 707765952226080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |