Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq19301 109 1e-18
seq3398 105 2e-17
seq77944 93.3 1e-13
seq13127 87.8 5e-12
seq5892 87.8 5e-12
>seq19301
Length=1192634
Score = 109 bits (120), Expect = 1e-18
Identities = 116/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| ||||| || |||||||| |||
Sbjct 383300 GCTCAGCAGCTGTGGTATGCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATG 383241
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||| ||| | |||||||||||| |||||||||| |||| || || || |
Sbjct 383240 CTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGC 383181
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|| ||| | || || |||||| | || ||||||
Sbjct 383180 AGTAACTTGTGCACAGAGATTGTAGAGTACACC 383148
>seq3398
Length=854497
Score = 105 bits (116), Expect = 2e-17
Identities = 115/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| ||||| || |||||||| |||
Sbjct 23393 GCTCAGCAGCTGTGGTATGCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATG 23452
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||| ||| | ||||||||||| |||||||||| |||| || || ||| |
Sbjct 23453 CTTTACAAGGATGCCTGCAACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGC 23512
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|| ||| | || || || ||| | || ||||||
Sbjct 23513 AGTAACTTGTGCACAGAAATTGTAGAGTACACC 23545
Score = 86.0 bits (94), Expect = 2e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809
|| ||||||||||| || || ||||| |||||||| || ||||| |||| |||| |||
Sbjct 29960 GCTCCCATGCCCACTGCCTCCACTGCTCAGATCCTGGGCAACAATGAGTCAATCGAGCCG 30019
Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGT 364859
| ||| ||||| | || ||||| | ||||| || ||||| |||| |||
Sbjct 30020 TATACTAGCAACATCTACACACGCAGAGTTCTGTCTGGAGAGTTTCAGGT 30069
>seq77944
Length=846
Score = 93.3 bits (102), Expect = 1e-13
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 364128 TGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTG 364187
||||||||| || || |||| ||||| || |||||||| ||| | ||||| ||| | ||
Sbjct 1 TGCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTG 60
Query 364188 CAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGA 364247
||||||||| |||||||||| |||| || || ||| | || ||| | || || ||
Sbjct 61 CAACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGA 120
Query 364248 GATTATTGAATACACC 364263
||| | || ||||||
Sbjct 121 AATTGTAGAGTACACC 136
>seq13127
Length=1962650
Score = 87.8 bits (96), Expect = 5e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 12822 TGTTGATCCAAATGTCAGAGAATCCATGTCTTCAGTTGCTGTGGCATACGCTTTTCCTGT 12881
||| | ||||||||||||| |||||| ||||| |||||||||||||| | || ||||
Sbjct 1934264 TGTCGTTCCAAATGTCAGACCATCCATATCTTCTGTTGCTGTGGCATAAACCTTCCCTGA 1934323
Query 12882 TTTTACATATGCAGCACATGTAGCTTCGGCCTCACATGGTGCTTGAAC 12929
||| || |||||||| | || || ||||||||||| || | |||
Sbjct 1934324 TTTCACCAGAGCAGCACAGCTCGCCTCCGCCTCACATGGAGCCTTAAC 1934371
>seq5892
Length=1868173
Score = 87.8 bits (96), Expect = 5e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 12822 TGTTGATCCAAATGTCAGAGAATCCATGTCTTCAGTTGCTGTGGCATACGCTTTTCCTGT 12881
||||| ||||||||||||| ||||| ||||| || ||||||||||| | || ||||
Sbjct 217034 TGTTGTTCCAAATGTCAGACCGTCCATATCTTCTGTCGCTGTGGCATAAACCTTCCCTGA 217093
Query 12882 TTTTACATATGCAGCACATGTAGCTTCGGCCTCACATGGTGCTTGAAC 12929
||| || |||||||| | || |||||||||||||| || | |||
Sbjct 217094 TTTCACCAGAGCAGCACAGCTCGCCTCGGCCTCACATGGAGCCTTAAC 217141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1301922777603324
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |