Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq19301 109 1e-18 seq3398 105 2e-17 seq77944 93.3 1e-13 seq13127 87.8 5e-12 seq5892 87.8 5e-12 >seq19301 Length=1192634 Score = 109 bits (120), Expect = 1e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| ||||||||| || || |||| ||||| || |||||||| ||| Sbjct 383300 GCTCAGCAGCTGTGGTATGCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATG 383241 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| ||| | |||||||||||| |||||||||| |||| || || || | Sbjct 383240 CTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGC 383181 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 || ||| | || || |||||| | || |||||| Sbjct 383180 AGTAACTTGTGCACAGAGATTGTAGAGTACACC 383148 >seq3398 Length=854497 Score = 105 bits (116), Expect = 2e-17 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| ||||||||| || || |||| ||||| || |||||||| ||| Sbjct 23393 GCTCAGCAGCTGTGGTATGCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATG 23452 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| ||| | ||||||||||| |||||||||| |||| || || ||| | Sbjct 23453 CTTTACAAGGATGCCTGCAACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGC 23512 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 || ||| | || || || ||| | || |||||| Sbjct 23513 AGTAACTTGTGCACAGAAATTGTAGAGTACACC 23545 Score = 86.0 bits (94), Expect = 2e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || ||||||||||| || || ||||| |||||||| || ||||| |||| |||| ||| Sbjct 29960 GCTCCCATGCCCACTGCCTCCACTGCTCAGATCCTGGGCAACAATGAGTCAATCGAGCCG 30019 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGT 364859 | ||| ||||| | || ||||| | ||||| || ||||| |||| ||| Sbjct 30020 TATACTAGCAACATCTACACACGCAGAGTTCTGTCTGGAGAGTTTCAGGT 30069 >seq77944 Length=846 Score = 93.3 bits (102), Expect = 1e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 364128 TGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTG 364187 ||||||||| || || |||| ||||| || |||||||| ||| | ||||| ||| | || Sbjct 1 TGCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTG 60 Query 364188 CAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGA 364247 ||||||||| |||||||||| |||| || || ||| | || ||| | || || || Sbjct 61 CAACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGA 120 Query 364248 GATTATTGAATACACC 364263 ||| | || |||||| Sbjct 121 AATTGTAGAGTACACC 136 >seq13127 Length=1962650 Score = 87.8 bits (96), Expect = 5e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 12822 TGTTGATCCAAATGTCAGAGAATCCATGTCTTCAGTTGCTGTGGCATACGCTTTTCCTGT 12881 ||| | ||||||||||||| |||||| ||||| |||||||||||||| | || |||| Sbjct 1934264 TGTCGTTCCAAATGTCAGACCATCCATATCTTCTGTTGCTGTGGCATAAACCTTCCCTGA 1934323 Query 12882 TTTTACATATGCAGCACATGTAGCTTCGGCCTCACATGGTGCTTGAAC 12929 ||| || |||||||| | || || ||||||||||| || | ||| Sbjct 1934324 TTTCACCAGAGCAGCACAGCTCGCCTCCGCCTCACATGGAGCCTTAAC 1934371 >seq5892 Length=1868173 Score = 87.8 bits (96), Expect = 5e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 12822 TGTTGATCCAAATGTCAGAGAATCCATGTCTTCAGTTGCTGTGGCATACGCTTTTCCTGT 12881 ||||| ||||||||||||| ||||| ||||| || ||||||||||| | || |||| Sbjct 217034 TGTTGTTCCAAATGTCAGACCGTCCATATCTTCTGTCGCTGTGGCATAAACCTTCCCTGA 217093 Query 12882 TTTTACATATGCAGCACATGTAGCTTCGGCCTCACATGGTGCTTGAAC 12929 ||| || |||||||| | || |||||||||||||| || | ||| Sbjct 217094 TTTCACCAGAGCAGCACAGCTCGCCTCGGCCTCACATGGAGCCTTAAC 217141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301922777603324