Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq13143 107 2e-18
seq46 107 2e-18
seq1581 102 7e-17
seq20611 96.9 3e-15
>seq13143
Length=1991197
Score = 107 bits (118), Expect = 2e-18
Identities = 165/233 (71%), Gaps = 12/233 (5%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | ||| || | |||||| ||||||||||| || ||||||||||||| |
Sbjct 1626614 CCCCCACGAAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1626555
Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824
| || |||||| || | || ||||| || | || || ||||| |||||
Sbjct 1626554 AGCGT----GCGTCCATCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGG 1626499
Query 16825 AGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGC 16882
||| | ||| || ||||| || || || |||||| | | | ||||||| ||||
Sbjct 1626498 AGGAATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCGCTGGGC 1626441
Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || | ||||||||| || || ||||| ||||| ||||| ||||||||
Sbjct 1626440 TCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 1626388
>seq46
Length=2207375
Score = 107 bits (118), Expect = 2e-18
Identities = 158/221 (71%), Gaps = 12/221 (5%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || ||||||||||| || ||||||||||||| || ||| ||||||
Sbjct 2030765 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGT----GCGTCC 2030710
Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839
|||| || ||||| || | || || ||||| ||||| ||| | ||| || ||
Sbjct 2030709 ATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTT 2030650
Query 16840 GTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTG 16897
||| || || ||| ||||| | | | ||||||| |||||| || | ||||
Sbjct 2030649 GTCTTGGATTTTAGCT--TTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTG 2030592
Query 16898 ATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
||||| || || |||||||| || ||||| |||||||| ||
Sbjct 2030591 ATGGTCTTGCCAGTCAGCGTCTTCACAAAGATCTGCATCTT 2030551
Score = 98.7 bits (108), Expect = 8e-16
Identities = 154/218 (71%), Gaps = 12/218 (6%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || ||||||||||| || ||||||||||||| || ||| ||||||
Sbjct 2030993 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGT----GCGTCC 2030938
Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839
|||| || ||||| || | || || ||||| ||||| ||| | ||| || ||
Sbjct 2030937 ATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTT 2030878
Query 16840 GTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTG 16897
|| || || || ||| || | | | ||||||| |||||| || | ||||
Sbjct 2030877 ATCCTGGATCTTGGC--CTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTG 2030820
Query 16898 ATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| || || |||||||| ||||| || ||||||||
Sbjct 2030819 ATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2030782
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || ||||||||||| || ||||||||||| | || ||| | |||
Sbjct 2031654 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCC 2031595
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|||| || ||||| || | || || ||||| || || ||| | ||| || |||||
Sbjct 2031594 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 2031535
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || || ||| || | | | ||||| | |||||| ||||| |||||||
Sbjct 2031534 TGGATCTTGGC--CTTGACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAAAGTGATGG 2031477
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| || || |||||||| ||||| || ||||||||
Sbjct 2031476 TCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2031443
Score = 89.7 bits (98), Expect = 4e-13
Identities = 161/233 (69%), Gaps = 12/233 (5%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | ||| || | ||| || ||||||||||| || ||||||||||||| |
Sbjct 2031897 CCGCCACGAAGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2031838
Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824
| ||| |||||| |||| || || || || | || || ||||| |||||
Sbjct 2031837 AGGGT----GCGTCCATCTTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGG 2031782
Query 16825 AGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGC 16882
||| | ||| || ||||| || || ||| || || | | | ||||||| ||||
Sbjct 2031781 AGGAATGCCTTCCTTGTCTTGGATTTTAGCT--TTGACATTCTCAATGGTGTCGCTGGGC 2031724
Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || | ||||||||| || || |||| || || || || ||||||||
Sbjct 2031723 TCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031671
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/208 (70%), Gaps = 12/208 (6%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || ||||||||||| || ||||||||||||| || ||| ||||||
Sbjct 2031426 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGT----GCGTCC 2031371
Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839
|||| || || || ||| | || || ||||| ||||| ||| | ||| || ||
Sbjct 2031370 ATCTTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTT 2031311
Query 16840 GTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTG 16897
||| || || || ||| || | | | ||||||| |||||| || | ||||
Sbjct 2031310 GTCCTGGATCTTGGC--CTTGACGTTCTCTATGGTGTCGCTGGGCTCAACCTCGAGGGTG 2031253
Query 16898 ATGGTTTTTCCGGTCAGCGTTTTGACAA 16925
|||||||| || |||| || || ||||
Sbjct 2031252 ATGGTTTTACCAGTCAAGGTCTTCACAA 2031225
Score = 82.4 bits (90), Expect = 6e-11
Identities = 151/219 (69%), Gaps = 12/219 (5%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| || | ||| || |||||||| || || ||||||||||||| || || |||||
Sbjct 2031222 CAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGT----GCGTC 2031167
Query 16783 C----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTT 16838
| ||||| |||||||| || | || | ||||| ||||| ||| | ||| || |
Sbjct 2031166 CATCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCT 2031107
Query 16839 TGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGT 16896
| || || || || ||| || | | | ||||||| |||||| || | |||
Sbjct 2031106 TATCCTGGATCTTGGC--CTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGT 2031049
Query 16897 GATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||||| || || |||| || || || || ||||||||
Sbjct 2031048 GATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031010
>seq1581
Length=2594311
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| | || | ||| |||| ||||| |||||||| || || ||||||||||| | |
Sbjct 1373171 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 1373230
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | || |||| |||||||| || | || |||| ||| ||||| ||
Sbjct 1373231 AGTGTGCGACCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGA 1373290
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| |||||||| || ||||| ||| || | | | ||||||| |||||
Sbjct 1373291 ATGCCTTCTTTGTCCTGGATCTTTGC--CTTGACGTTCTCAATGGTGTCGCTTGGCTCGA 1373348
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||||||| || || || || ||||||||||| ||||||||
Sbjct 1373349 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1373397
>seq20611
Length=922441
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| | || | ||| || | ||||| |||||||| || || ||||||||||| | |
Sbjct 520545 CCTCCCCTGAGACGCAGCACAAGATGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 520604
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | || |||| |||||||| ||| | || | || ||| ||||| ||
Sbjct 520605 AATGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGA 520664
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| |||||||| || || || ||| || | | | ||||||| |||||
Sbjct 520665 ATGCCTTCTTTGTCCTGGATCTTAGC--CTTGACGTTCTCAATTGTGTCGCTTGGCTCAA 520722
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||||||| || || || || ||||||||||| ||||||||
Sbjct 520723 CCTCAAGGGTGATGGTCTTACCAGTGAGGGTTTTGACAAAGATCTGCAT 520771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404664987109180
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