Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq4387 127 1e-24
seq14590 118 7e-22
seq20726 113 3e-20
seq3375 107 1e-18
seq46 98.7 7e-16
seq20724 95.1 8e-15
seq9601 95.1 8e-15
seq20611 91.5 1e-13
seq13143 91.5 1e-13
seq3400 91.5 1e-13
seq9779 86.0 4e-12
>seq4387
Length=3233148
Score = 127 bits (140), Expect = 1e-24
Identities = 85/95 (89%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||||||||| || ||||| || ||||||||
Sbjct 1175612 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGCAGGTAGGGACAGTGGGAATCTCGT 1175671
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 1175672 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1175706
>seq14590
Length=5833377
Score = 118 bits (130), Expect = 7e-22
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||| |||||||||||||||||||||| | || ||||| || ||||||||
Sbjct 2339274 AAGCCCGTTCTCTTGGCTGTGGTTTCGCTAGATCGCAGGTAGGGACAGTGGGAATCTCGT 2339333
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 2339334 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 2339368
Score = 114 bits (126), Expect = 9e-21
Identities = 81/93 (87%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||| |||||||||||||||||||||| | || ||||| || ||||||||
Sbjct 2339910 AAGCCCGTTCTCTTGGCTGTGGTTTCGCTAGATCGCAGGTAGGGACAGTGGGAATCTCGT 2339969
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989
| |||| ||||||||||||||||||||||||||
Sbjct 2339970 TCATCCATTCATGCGCGTCACTAATTAGATGAC 2340002
>seq20726
Length=1727696
Score = 113 bits (124), Expect = 3e-20
Identities = 71/77 (92%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 233765 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTGACTATCGGTCTCGT 233824
Query 20007 GGTAATATTTAGCCTTA 20023
| | ||||||||||||
Sbjct 233825 GCCAGTATTTAGCCTTA 233841
>seq3375
Length=89888
Score = 107 bits (118), Expect = 1e-18
Identities = 80/94 (85%), Gaps = 5/94 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||| |||||||||| |||||||||||||||||| || ||||| || ||||||||
Sbjct 72416 AAGCCTGTTCCCTTGGATGTGGTTTCGCTAGATAGCAGGTAGGGACAGTGGGAATCTCGT 72475
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACG 25990
| |||| |||||| | ||||||||||||||||||
Sbjct 72476 TCATCCATTCATGTGAGTCACTAATTAGATGACG 72509
>seq46
Length=2207375
Score = 98.7 bits (108), Expect = 7e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||||| ||| | ||||| || |||||| |||||| || || ||||| ||||
Sbjct 2031671 TACCACCTCTCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 2031612
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || || | || || || || || || || || || ||||| | |
Sbjct 2031611 ACAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAG 2031552
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||| |||||| || || ||| || |||| | || || | ||||
Sbjct 2031551 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAA 2031492
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| || || || || || || |||| || || ||||| ||||||||
Sbjct 2031491 CTTCCAAAGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2031443
Score = 89.7 bits (98), Expect = 3e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||||| ||| | ||||| || |||||| |||||| || || ||||| || |
Sbjct 2031443 TACCACCTCTCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 2031384
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || || | || || || ||||| || || || || || || | |
Sbjct 2031383 ACAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGAG 2031324
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||| |||||| || || ||| || |||| | || || | ||||
Sbjct 2031323 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCTATGGTGTCGCTGGGCTCAA 2031264
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305
| || | || || |||||||| |||||||| |||||
Sbjct 2031263 CCTCGAGGGTGATGGTTTTACCAGTCAAGGTCTTCAC 2031227
>seq20724
Length=3546869
Score = 95.1 bits (104), Expect = 8e-15
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380
|| || || ||||| || || || | || |||||||| ||||||||| ||| || ||
Sbjct 2005640 CCAACTAAGTATTTTGGCTGTGAGTTGGGGGCTCAGACTCAGTTTGATGCCAAGAATGAC 2005581
Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440
|||| ||| || |||||||| ||| | | ||| ||||||||| | || || || ||
Sbjct 2005580 CGCTACATTGTAAACGGATCCCATGAAGCCAACAAACTGCAGGACATGCTGGATGGATTC 2005521
Query 6441 ATTCGCAAGTTTGTGCTGTG 6460
|| | |||||||||||||||
Sbjct 2005520 ATCCACAAGTTTGTGCTGTG 2005501
>seq9601
Length=1517688
Score = 95.1 bits (104), Expect = 8e-15
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380
|| || || ||||| || || || | || |||||||| ||||||||| || || ||
Sbjct 1509079 CCAACTAAGTATTTTGGCTGTGAGTTGGGGGCTCAGACTCAGTTTGATGCTAAGAATGAC 1509138
Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440
|||| |||||| |||||||| ||| | | ||| ||||||||| | || || || ||
Sbjct 1509139 CGCTACATCGTAAACGGATCCCATGAAGCCAACAAACTGCAGGACATGCTGGATGGATTC 1509198
Query 6441 ATTCGCAAGTTTGTGCTGTG 6460
|| | |||||||||||||||
Sbjct 1509199 ATCCACAAGTTTGTGCTGTG 1509218
>seq20611
Length=922441
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
||| || || | ||||||||||| ||| | ||| ||| ||||| || ||||| |||||
Sbjct 520316 ACCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGA 520375
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
||| || | || || | ||||| |||||||| || | | || || || | |||
Sbjct 520376 CAATGTGCGACCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 520435
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT---TC 38266
| |||||||| ||| || || ||| || |||| | || | ||||| ||
Sbjct 520436 AATACCTTCTTTATCCTGGATCTTAGCCTTGACGTTCTCAATGGTGT---CACTTGGCTC 520492
Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
||| || | || || || || || |||||||| || ||||| |||||||||
Sbjct 520493 AACCTCAAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCATG 520544
>seq13143
Length=1991197
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||||| ||||| || | ||| || ||| ||||| || || ||||||||||
Sbjct 1624822 TACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAG 1624763
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || || || || || || ||||| || || || || || || | |
Sbjct 1624762 ACAGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAG 1624703
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| |||||| ||||| ||||| || || |||| | || || | ||||
Sbjct 1624702 GGATGCCTTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAA 1624643
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
| || | || || || || || |||| || || ||||| |||||||| |||
Sbjct 1624642 CCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATCTTT 1624590
>seq3400
Length=902154
Score = 91.5 bits (100), Expect = 1e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 6318 TACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAAC 6377
|| || || |||| || || || || | || || || || ||||| ||| ||| ||
Sbjct 242369 TATCCCACCAAATTCTTTGGTTGTGAGTTGGGAGCCCAAACCCAGTTCGATAGCAAGAAT 242310
Query 6378 GAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGC 6437
|| |||| |||||| || ||||| ||| | | ||| ||||| ||| | || || ||
Sbjct 242309 GACCGCTACATCGTCAATGGATCTCATGAAGCAAACAAACTGCAAGACATGCTAGATGGA 242250
Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
|| |||||||||||||||||||||| || || || || || || || ||
Sbjct 242249 TTCATTCGCAAGTTTGTGCTGTGTCCTGAGTGTGACAATCCTGAAACTGA 242200
>seq9779
Length=2398276
Score = 86.0 bits (94), Expect = 4e-12
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380
|| || |||| || || || || | || || || || ||||||||| ||| || ||
Sbjct 1794580 CCCACCAAATTCTTTGGTTGTGAGTTGGGAGCCCAAACCCAGTTTGATACCAAGAATGAC 1794521
Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440
|||| |||||| || ||||| ||| | | ||| ||||| ||| | || || || ||
Sbjct 1794520 CGCTACATCGTCAATGGATCTCATGAGGCAAACAAACTGCAAGACATGCTAGATGGATTC 1794461
Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
|||| |||||||||||||||| || || || || || || || ||
Sbjct 1794460 ATTCATAAGTTTGTGCTGTGTCCTGAGTGTGACAATCCTGAAACTGA 1794414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334597431595742
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