Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq85036 122 1e-22
seq19301 122 1e-22
seq3398 122 1e-22
seq16819 105 8e-18
seq11759 105 8e-18
seq11199 102 1e-16
seq6006 82.4 1e-10
>seq85036
Length=2202
Score = 122 bits (134), Expect = 1e-22
Identities = 117/150 (78%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126
|| |||||| ||||| ||||||||||| ||||| || || ||| |||||||| | |||
Sbjct 1123 CTCCACTCGCTTCATGAAGAGATCAGGGATCCAGAGGGCGTAAAACAGATCTCTAGCTCT 1064
Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186
|||||||| || || || ||||||||||| || ||||| | | ||| ||| |||||||
Sbjct 1063 CTGTTCCTCTTTACCAGTGTTCTTTTTAAGCTCTAGGAAGTCGAAAATGTCAAAATGCCA 1004
Query 63187 CGGTTCCAAGTATATGGCCATAACTCCAGG 63216
|| |||| ||| ||||| | | |||| ||
Sbjct 1003 GGGCTCCAGGTACATGGCAAAAGCTCCTGG 974
>seq19301
Length=1192634
Score = 122 bits (134), Expect = 1e-22
Identities = 117/150 (78%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126
|| |||||| ||||| ||||||||||| ||||| || || ||| |||||||| | |||
Sbjct 386050 CTCCACTCGCTTCATGAAGAGATCAGGGATCCAGAGGGCATAAAACAGATCTCTAGCTCT 386109
Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186
|||||||| || || |||||||||||||| || ||||| | | ||| ||| |||||||
Sbjct 386110 CTGTTCCTCTTTACCAGTATTCTTTTTAAGCTCTAGGAAGTCAAAAATGTCAAAATGCCA 386169
Query 63187 CGGTTCCAAGTATATGGCCATAACTCCAGG 63216
|| |||| ||| || || | | |||| ||
Sbjct 386170 GGGCTCCAGGTACATAGCAAAAGCTCCTGG 386199
Score = 96.9 bits (106), Expect = 4e-15
Identities = 125/170 (74%), Gaps = 2/170 (1%)
Strand=Plus/Plus
Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976
|||| || || || ||||| || || |||||| ||| | || || || || ||||| |
Sbjct 380616 TCCAGCCATAGAAGTGCATGCTGGTCAGTTTGCCATAGTTGGGTTCAGCGATGTGGATGT 380675
Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036
| | || || || || || ||||||||||| |||||||||||||| |||| || ||||
Sbjct 380676 TGAGGGACTGGCTCTGGTCAATGAAGGCTCCTCTGTCTGCAGCCATCTTTAAGATGGTCT 380735
Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62085
|||| | || ||||| | || ||||| | ||| ||| | || |||||
Sbjct 380736 TTTGAGAGATCTCCCACACCGTCTTATACAGCTC-CTTCAGGTCATCTGG 380784
Score = 86.0 bits (94), Expect = 8e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526
|| || ||||| || | ||||||||||||||||| ||||| || ||||| || ||||||
Sbjct 386754 GTGCCGGCATTGAAGAGTGTAGGAGAAGCGTGAGTGAACCACTTCTCAGAGAGCAGATTG 386813
Query 63527 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63586
|| || || ||||||| | || ||| | ||| ||||| || | || | ||| | |
Sbjct 386814 TAGGTTTCTATAGCTGCCGCAATGTCCTCCTTATGGATTCCCACGGACACTCTCATCAGC 386873
Query 63587 ATGTGCTGAGGTCTTTCAACGA 63608
||||| || || | ||| |||
Sbjct 386874 ATGTGTTGTGGCCGCTCAGCGA 386895
>seq3398
Length=854497
Score = 122 bits (134), Expect = 1e-22
Identities = 117/150 (78%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126
|| |||||| ||||| ||||||||||| ||||| || || ||| |||||||| | |||
Sbjct 22329 CTCCACTCGCTTCATGAAGAGATCAGGGATCCAGAGGGCGTAAAACAGATCTCTAGCTCT 22270
Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186
|||||||| || || || ||||||||||| || ||||| | | ||| ||| |||||||
Sbjct 22269 CTGTTCCTCTTTACCAGTGTTCTTTTTAAGCTCTAGGAAGTCGAAAATGTCAAAATGCCA 22210
Query 63187 CGGTTCCAAGTATATGGCCATAACTCCAGG 63216
|| |||| ||| ||||| | | |||| ||
Sbjct 22209 GGGCTCCAGGTACATGGCAAAAGCTCCTGG 22180
Score = 102 bits (112), Expect = 1e-16
Identities = 124/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976
|||| || || || ||||| || || |||||| ||| | || || || || ||||| |
Sbjct 30534 TCCAGCCATAGAAGTGCATGCTGGTCAGTTTGCCATAGTTGGGTTCAGCAATGTGGATGT 30475
Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036
| | || || || || || ||||||||||| |||||||||||||| |||| || ||||
Sbjct 30474 TGAGGGACTGGCTCTGGTCAATGAAGGCTCCTCTGTCTGCAGCCATCTTTAAGATGGTCT 30415
Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 62085
|||| | || ||||| | ||| ||||| | | ||| | || |||||
Sbjct 30414 TTTGCGAGATCTCCCACACAGTCTTATACAGTTCCTTCAGGTCATCTGG 30366
>seq16819
Length=1945512
Score = 105 bits (116), Expect = 8e-18
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||| ||||| || || | ||| ||||| || |||||||| ||||| || || | ||| |
Sbjct 739164 CCTCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCT 739105
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| ||||| || || || ||||| || ||||||||||| |||||||| || || ||||| |
Sbjct 739104 TTAGCCAGAAAATAGAAGCAAAAGACCCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 739045
Query 32803 CAATAAGTCTCTCTCC 32818
| | | |||||| ||
Sbjct 739044 CCACCACTCTCTCCCC 739029
Score = 87.8 bits (96), Expect = 2e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980
|||||| | ||| || |||||||| ||||| |||||||| || ||||||||||| || ||
Sbjct 738601 ATCTTTGATATAGGTGTCAATCAACAGACTGTACATTTCAGAGTGAATGTTTTCCATTGC 738542
Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGT 33013
|| || || ||||||||||| | || |||||
Sbjct 738541 AATCTGGAAACCGTAGAAGCAACGGGCTTCGGT 738509
Score = 84.2 bits (92), Expect = 3e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 33171 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGA 33230
||||| || || ||||||||||| || ||||| | |||||||||||| || |||||||||
Sbjct 738107 GTCCAGAAGGAGGCCTCTGCCTTCTTGTACATCTGCCAGATGTCATGGTACTGAATTGGA 738048
Query 33231 AAAATAACAAA 33241
||||| |||||
Sbjct 738047 AAAATTACAAA 738037
>seq11759
Length=1730004
Score = 105 bits (116), Expect = 8e-18
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||| ||||| || || | ||| ||||| | |||||||||||||| ||||| | || |
Sbjct 147487 CCTCATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCGCTTTTCT 147546
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| | ||| | |||| |||||||||||||| ||||| || ||||||||||| ||||| |
Sbjct 147547 TCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCTACTGCTGCAAATG 147606
Query 32803 CAATAAGTCTCTCTCC 32818
| | | || ||||||
Sbjct 147607 CTACTAATCGCTCTCC 147622
Score = 100 bits (110), Expect = 4e-16
Identities = 84/103 (82%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 33153 ATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATG 33212
|||| ||| || || |||||||| ||||| |||| || | ||| ||||| |||||||||
Sbjct 149176 ATATTCACCTCCTCAACTGTCCAGAATGAAGCCTGAGCTTGTTTGTACATTTTCCAGATG 149235
Query 33213 TCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTT 33255
||| |||| ||||| |||||||| ||||||| ||||| ||||
Sbjct 149236 TCAGGATACTGAATAGGAAAAATGACAAATCGCTTTGGGTTTT 149278
>seq11199
Length=1679328
Score = 102 bits (112), Expect = 1e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||| ||||| || || | ||| ||||| | |||||||||||||| ||||| | || |
Sbjct 643754 CCTCATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCTCTTTTCT 643695
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| | ||| | |||| |||||||||||||| ||||| || ||||| ||||| ||||| |
Sbjct 643694 TCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCCACTGCTGCAAATG 643635
Query 32803 CAATAAGTCTCTCTCC 32818
| | | || ||||||
Sbjct 643634 CTACTAATCGCTCTCC 643619
Score = 96.9 bits (106), Expect = 4e-15
Identities = 83/103 (81%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 33153 ATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATG 33212
|||| ||| || || |||||||| ||||| |||| || | ||| ||||| |||||||||
Sbjct 641027 ATATTCACCTCCTCAACTGTCCAGAATGAAGCCTGAGCTTGTTTGTACATTTTCCAGATG 640968
Query 33213 TCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTT 33255
||| |||| ||||| || ||||| ||||||| ||||| ||||
Sbjct 640967 TCAGGATACTGAATAGGGAAAATGACAAATCGTTTTGGGTTTT 640925
>seq6006
Length=139621
Score = 82.4 bits (90), Expect = 1e-10
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980
|||||| | || || |||||||| ||||| |||||||| || || |||||||| |||||
Sbjct 86767 ATCTTTGATGTAGGTGTCAATCAACAGACTGTACATTTCAGAGTGGATGTTTTCCATGGC 86826
Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTC 33025
|| || || ||||||||||| | || || || | || |||||
Sbjct 86827 AATCTGGAAACCGTAGAAGCAACGGGCTTCAGTCACTTGGACTTC 86871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632953364287200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |