Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq1581 87.8 2e-12 >seq1581 Length=2594311 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 111179 GTTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGG 111238 ||||| | ||||| || ||||||||||| | || ||||| ||||| ||| | || | Sbjct 1373405 GTTTATAGATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCG 1373346 Query 111239 AACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCG 111298 | || ||||| | ||| | || || ||| || |||||||||||| ||||| Sbjct 1373345 AGCCAAGCGACACCATTGAGAACGTCAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCC 1373286 Query 111299 TCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCG 111358 || || || ||||| || | || |||||||| |||||||| | || || | | Sbjct 1373285 CTGACCAGCAGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATGGTCGCACACTGTCTG 1373226 Query 111359 ATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCT 111404 | || || || || ||||| || || | ||| | ||| ||||||| Sbjct 1373225 ACTACAACATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCT 1373180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422598240744400