Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq13241 93.3 9e-14 seq13180 93.3 9e-14 seq5907 93.3 9e-14 seq1560 93.3 9e-14 seq23513 91.5 3e-13 seq19312 91.5 3e-13 seq14620 91.5 3e-13 seq11833 91.5 3e-13 seq16117 89.7 1e-12 seq17852 87.8 4e-12 seq1610 87.8 4e-12 seq5943 86.0 1e-11 seq4503 86.0 1e-11 seq1482 86.0 1e-11 seq12434 84.2 4e-11 >seq13241 Length=703754 Score = 93.3 bits (102), Expect = 9e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895 ||||||||| ||||||||||| |||||||| || || ||||| | ||||| | Sbjct 117140 CTGCACTCTGATCCTGACAGAAGGAGACTCGGCCAAAACTCTGGCCGTGTCGGGTCTAGG 117199 Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955 |||||||| ||||| | |||||| ||||||| || |||||||| ||||||| || || Sbjct 117200 TGTGGTGGGACGTGACCGCTATGGTGTCTTCCCTCTGCGTGGTAAAATGCTCAATGTTCG 117259 Query 217956 CGATGCCTC 217964 || || || Sbjct 117260 AGAGGCATC 117268 >seq13180 Length=612404 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||| |||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 42105 TAGCTCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 42046 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 42045 GCCCCACGTTGGGC 42032 >seq5907 Length=2227753 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 1797737 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1797678 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 1797677 GCCCCACGTTGGGC 1797664 >seq1560 Length=1241252 Score = 93.3 bits (102), Expect = 9e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895 ||||||||| ||||||||||| |||||||| || || ||||| | ||||| | Sbjct 118728 CTGCACTCTGATCCTGACAGAAGGAGACTCGGCCAAAACTCTGGCCGTGTCAGGTCTGGG 118787 Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955 |||||||| ||||| | |||||| ||||||| || |||||||| | ||||||||| | Sbjct 118788 TGTGGTGGGACGTGATCGCTATGGTGTCTTCCCTCTGCGTGGTAAAATCCTCAACGTGAG 118847 Query 217956 CGATGCCTC 217964 || || || Sbjct 118848 AGAGGCGTC 118856 >seq23513 Length=865 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 80 AGCCCGGCTAGCTCAGTCGGTAGAGCATAAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 139 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 140 CCCCACGTTGGGC 152 >seq19312 Length=1651327 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 791564 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 791623 Query 142564 CCCACATCGGGCAGAAGT 142581 ||||| | |||| |||| Sbjct 791624 CCCACGTTGGGCGCAAGT 791641 >seq14620 Length=4294994 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 122104 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 122163 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 122164 CCCCACGTTGGGC 122176 >seq11833 Length=1575278 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 936890 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 936831 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 936830 CCCCACGTTGGGC 936818 >seq16117 Length=464039 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 387420 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 387361 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 387360 CCCACGTTGGGC 387349 >seq17852 Length=469321 Score = 87.8 bits (96), Expect = 4e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||| |||||||||||| ||||||||||||| | ||||||||||||||| Sbjct 457708 AGCCCGGCTAGCACAGTCGGTAGAGAATGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 457649 Query 142563 CCCCACAT 142570 |||||||| Sbjct 457648 CCCCACAT 457641 >seq1610 Length=1596030 Score = 87.8 bits (96), Expect = 4e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 ||||||||||||||||||| |||||| ||||||||||||||| ||| | ||||||||| Sbjct 517929 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 517870 Query 142112 CCCCGCCAGAGACGC 142126 |||| |||||| || Sbjct 517869 TCCCGGCAGAGATGC 517855 >seq5943 Length=767945 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 ||||||||||||||||||| |||||| ||||||||||||||| ||| | ||||||||| Sbjct 131137 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 131078 Query 142112 CCCCGCCAGAGA 142123 |||| |||||| Sbjct 131077 TCCCGGCAGAGA 131066 >seq4503 Length=697660 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 142506 CCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCC 142565 |||| |||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 660170 CCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCC 660111 Query 142566 CACATCGGGC 142575 ||| | |||| Sbjct 660110 CACCTTGGGC 660101 >seq1482 Length=2941767 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 ||||||||||||||||||| |||||| ||||||||||||||| ||| | ||||||||| Sbjct 1174365 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 1174306 Query 142112 CCCCGCCAGAGA 142123 |||| |||||| Sbjct 1174305 TCCCGGCAGAGA 1174294 >seq12434 Length=3100 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct 1614 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCCCATGGTCATGGGTTCGAGC 1673 Query 142564 CCCACATCGGG 142574 ||||| | ||| Sbjct 1674 CCCACGTTGGG 1684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026708440118562