Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq13241 93.3 9e-14
seq13180 93.3 9e-14
seq5907 93.3 9e-14
seq1560 93.3 9e-14
seq23513 91.5 3e-13
seq19312 91.5 3e-13
seq14620 91.5 3e-13
seq11833 91.5 3e-13
seq16117 89.7 1e-12
seq17852 87.8 4e-12
seq1610 87.8 4e-12
seq5943 86.0 1e-11
seq4503 86.0 1e-11
seq1482 86.0 1e-11
seq12434 84.2 4e-11
>seq13241
Length=703754
Score = 93.3 bits (102), Expect = 9e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895
||||||||| ||||||||||| |||||||| || || ||||| | ||||| |
Sbjct 117140 CTGCACTCTGATCCTGACAGAAGGAGACTCGGCCAAAACTCTGGCCGTGTCGGGTCTAGG 117199
Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955
|||||||| ||||| | |||||| ||||||| || |||||||| ||||||| || ||
Sbjct 117200 TGTGGTGGGACGTGACCGCTATGGTGTCTTCCCTCTGCGTGGTAAAATGCTCAATGTTCG 117259
Query 217956 CGATGCCTC 217964
|| || ||
Sbjct 117260 AGAGGCATC 117268
>seq13180
Length=612404
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 42105 TAGCTCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 42046
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 42045 GCCCCACGTTGGGC 42032
>seq5907
Length=2227753
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 1797737 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1797678
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 1797677 GCCCCACGTTGGGC 1797664
>seq1560
Length=1241252
Score = 93.3 bits (102), Expect = 9e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895
||||||||| ||||||||||| |||||||| || || ||||| | ||||| |
Sbjct 118728 CTGCACTCTGATCCTGACAGAAGGAGACTCGGCCAAAACTCTGGCCGTGTCAGGTCTGGG 118787
Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955
|||||||| ||||| | |||||| ||||||| || |||||||| | ||||||||| |
Sbjct 118788 TGTGGTGGGACGTGATCGCTATGGTGTCTTCCCTCTGCGTGGTAAAATCCTCAACGTGAG 118847
Query 217956 CGATGCCTC 217964
|| || ||
Sbjct 118848 AGAGGCGTC 118856
>seq23513
Length=865
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 80 AGCCCGGCTAGCTCAGTCGGTAGAGCATAAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 139
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 140 CCCCACGTTGGGC 152
>seq19312
Length=1651327
Score = 91.5 bits (100), Expect = 3e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 791564 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 791623
Query 142564 CCCACATCGGGCAGAAGT 142581
||||| | |||| ||||
Sbjct 791624 CCCACGTTGGGCGCAAGT 791641
>seq14620
Length=4294994
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 122104 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 122163
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 122164 CCCCACGTTGGGC 122176
>seq11833
Length=1575278
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 936890 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 936831
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 936830 CCCCACGTTGGGC 936818
>seq16117
Length=464039
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 387420 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 387361
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 387360 CCCACGTTGGGC 387349
>seq17852
Length=469321
Score = 87.8 bits (96), Expect = 4e-12
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||| |||||||||||| ||||||||||||| | |||||||||||||||
Sbjct 457708 AGCCCGGCTAGCACAGTCGGTAGAGAATGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 457649
Query 142563 CCCCACAT 142570
||||||||
Sbjct 457648 CCCCACAT 457641
>seq1610
Length=1596030
Score = 87.8 bits (96), Expect = 4e-12
Identities = 65/75 (87%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 517929 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 517870
Query 142112 CCCCGCCAGAGACGC 142126
|||| |||||| ||
Sbjct 517869 TCCCGGCAGAGATGC 517855
>seq5943
Length=767945
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 131137 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 131078
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 131077 TCCCGGCAGAGA 131066
>seq4503
Length=697660
Score = 86.0 bits (94), Expect = 1e-11
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 142506 CCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCC 142565
|||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 660170 CCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCC 660111
Query 142566 CACATCGGGC 142575
||| | ||||
Sbjct 660110 CACCTTGGGC 660101
>seq1482
Length=2941767
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 1174365 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 1174306
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 1174305 TCCCGGCAGAGA 1174294
>seq12434
Length=3100
Score = 84.2 bits (92), Expect = 4e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||
Sbjct 1614 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCCCATGGTCATGGGTTCGAGC 1673
Query 142564 CCCACATCGGG 142574
||||| | |||
Sbjct 1674 CCCACGTTGGG 1684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1026708440118562
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |