Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq13143 152 1e-31 seq46 149 1e-30 seq1581 122 2e-22 seq20611 120 7e-22 >seq13143 Length=1991197 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||| | ||| ||| || ||||| || || || | ||||||||||| ||| Sbjct 1624805 AGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCATCT 1624746 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || || || || || || |||||||||||||| || | ||||| ||||| || || Sbjct 1624745 TCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 1624686 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| ||||| ||||| || || | ||||| | || || ||||| ||||| ||| Sbjct 1624685 TGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1624626 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||||||||| |||||||| Sbjct 1624625 TTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 1624594 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || |||||||| | ||| || || ||||| || ||||||| ||||||||||| ||| Sbjct 1626599 AGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCT 1626540 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || ||||||||||||||||| || | || || ||||| || ||| Sbjct 1626539 TCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 1626480 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || |||||||| || || | ||||| | || || ||||| ||||| ||| Sbjct 1626479 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1626420 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || || || |||||||| Sbjct 1626419 TTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 1626388 Score = 100 bits (110), Expect = 7e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 || || |||||||||||||| || | || || ||||| || || |||||||| ||| Sbjct 1625752 CCAGCTAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGATTTTAGCT 1625693 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || ||||| || || | || || | || || || || ||||| ||||| || ||||| Sbjct 1625692 TTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGT 1625633 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||||||||| |||||||| Sbjct 1625632 GTCTTGACGAAGATCTGCAT 1625613 Score = 96.9 bits (106), Expect = 8e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||| | ||| ||| || ||||| || || || | ||||||||||| ||| Sbjct 1625596 AGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCATCT 1625537 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || || || || || || |||||||||||||| || | ||||| ||||| || || Sbjct 1625536 TCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 1625477 Query 288382 TGGATTTTCGCTTTCACGTTTTCTAT 288407 |||||||| ||||| ||||| || || Sbjct 1625476 TGGATTTTAGCTTTGACGTTCTCAAT 1625451 >seq46 Length=2207375 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||| | ||| ||||| ||||| || ||||||| || |||||||| ||| Sbjct 2031221 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCT 2031162 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || || ||||| || |||||||||| |||||| || | || || ||||| |||||| Sbjct 2031161 TCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 2031102 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || || ||||| || || | ||||| | || || ||||| ||||| ||| Sbjct 2031101 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 2031042 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||| ||||| ||||| |||||||| Sbjct 2031041 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031010 Score = 147 bits (162), Expect = 5e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || |||||||| ||||| | || || || |||||| Sbjct 2030972 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAG 2030913 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || | || || ||||| ||||||||||| || || || ||||| Sbjct 2030912 ATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTC 2030853 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || ||||| ||||| ||||| || ||||| ||||||||| Sbjct 2030852 TCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACG 2030793 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 2030792 AAGATCTGCAT 2030782 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || |||||||| | ||| || || ||||| || ||||||| || |||||||| ||| Sbjct 2031882 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 2031823 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || ||||||||||||||||| || | || || ||||| || || Sbjct 2031822 TCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCT 2031763 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| ||||| || || || || | ||||| | || || ||||| ||||| ||| Sbjct 2031762 TGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 2031703 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||| ||||| ||||| |||||||| Sbjct 2031702 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031671 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || |||||||| ||||| | || || || |||||| Sbjct 2030744 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAG 2030685 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || | || || ||||| || || |||||||| |||||||| || Sbjct 2030684 ATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGATTTTAGCTTTCACATTC 2030625 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || ||||| ||||| ||||| || ||||| ||||| || Sbjct 2030624 TCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTCACA 2030565 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 2030564 AAGATCTGCAT 2030554 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || |||||||| || || | || || || |||||| Sbjct 2031633 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAG 2031574 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| ||| | || || ||||| || |||||||| || || || ||||| Sbjct 2031573 ATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTC 2031514 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || ||||| | ||||| ||||| || ||||| ||||||||| Sbjct 2031513 TCAATGGTGTCACTGGGCTCAACTTCCAAAGTGATGGTCTTGCCAGTCAGCGTCTTGACG 2031454 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 2031453 AAGATCTGCAT 2031443 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || |||||||| ||||| | || || || || ||| Sbjct 2031405 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCAAAG 2031346 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || | || || ||||| || |||||||| || || || ||||| Sbjct 2031345 ATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTC 2031286 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||||| | ||||| | || || ||||| ||||| || || || |||| ||||| || Sbjct 2031285 TCTATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTCAAGGTCTTCAC 2031227 >seq1581 Length=2594311 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||| | ||| ||||| ||||| || ||||| | || ||||| || ||| Sbjct 1373186 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCATCT 1373245 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | ||||| || ||||||||||| | ||| || | || || |||||||| ||| Sbjct 1373246 TCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 1373305 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || || ||||| || || | ||||| | || || || || ||||| ||| Sbjct 1373306 TGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGATGGTC 1373365 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| || |||||||| Sbjct 1373366 TTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1373397 >seq20611 Length=922441 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || ||||| | ||| ||||||||||| || ||||| | | ||||| || ||||| Sbjct 520335 ACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACCATCTTCC 520394 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | ||||| || || ||||||| | ||| || | || || ||||||||||||||| Sbjct 520395 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCTTCTTTATCCTGG 520454 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444 || || || || ||||| || || | || || | || || || || ||||| ||||| Sbjct 520455 ATCTTAGCCTTGACGTTCTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGTCTTG 520514 Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||| ||||||||||| |||||||| Sbjct 520515 CCTGTCAAGGTCTTGACGAAGATCTGCAT 520543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178359374662396