Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq13143 152 1e-31
seq46 149 1e-30
seq1581 122 2e-22
seq20611 120 7e-22
>seq13143
Length=1991197
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| || ||||| | ||| ||| || ||||| || || || | ||||||||||| |||
Sbjct 1624805 AGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCATCT 1624746
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| || || || || || |||||||||||||| || | ||||| ||||| || ||
Sbjct 1624745 TCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 1624686
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
|||||||| ||||| ||||| || || | ||||| | || || ||||| ||||| |||
Sbjct 1624685 TGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1624626
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||||||||| ||||||||
Sbjct 1624625 TTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 1624594
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| |||||||| | ||| || || ||||| || ||||||| ||||||||||| |||
Sbjct 1626599 AGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCT 1626540
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| | || || || ||||||||||||||||| || | || || ||||| || |||
Sbjct 1626539 TCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 1626480
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
||||| || || |||||||| || || | ||||| | || || ||||| ||||| |||
Sbjct 1626479 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1626420
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || || || || ||||||||
Sbjct 1626419 TTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 1626388
Score = 100 bits (110), Expect = 7e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393
|| || |||||||||||||| || | || || ||||| || || |||||||| |||
Sbjct 1625752 CCAGCTAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGATTTTAGCT 1625693
Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453
|| ||||| || || | || || | || || || || ||||| ||||| || |||||
Sbjct 1625692 TTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGT 1625633
Query 288454 GTCTTGACGAATATCTGCAT 288473
||||||||||| ||||||||
Sbjct 1625632 GTCTTGACGAAGATCTGCAT 1625613
Score = 96.9 bits (106), Expect = 8e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| || ||||| | ||| ||| || ||||| || || || | ||||||||||| |||
Sbjct 1625596 AGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCATCT 1625537
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| || || || || || |||||||||||||| || | ||||| ||||| || ||
Sbjct 1625536 TCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 1625477
Query 288382 TGGATTTTCGCTTTCACGTTTTCTAT 288407
|||||||| ||||| ||||| || ||
Sbjct 1625476 TGGATTTTAGCTTTGACGTTCTCAAT 1625451
>seq46
Length=2207375
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| || ||||| | ||| ||||| ||||| || ||||||| || |||||||| |||
Sbjct 2031221 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCT 2031162
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| || ||||| || |||||||||| |||||| || | || || ||||| ||||||
Sbjct 2031161 TCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 2031102
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
||||| || || || ||||| || || | ||||| | || || ||||| ||||| |||
Sbjct 2031101 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 2031042
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || |||| ||||| ||||| ||||||||
Sbjct 2031041 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031010
Score = 147 bits (162), Expect = 5e-30
Identities = 147/191 (77%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || |||||||| ||||| | || || || ||||||
Sbjct 2030972 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAG 2030913
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || | || || ||||| ||||||||||| || || || |||||
Sbjct 2030912 ATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTC 2030853
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||||| | || || ||||| ||||| ||||| || ||||| |||||||||
Sbjct 2030852 TCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACG 2030793
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 2030792 AAGATCTGCAT 2030782
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| |||||||| | ||| || || ||||| || ||||||| || |||||||| |||
Sbjct 2031882 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 2031823
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| | || || || ||||||||||||||||| || | || || ||||| || ||
Sbjct 2031822 TCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCT 2031763
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
|||||||| ||||| || || || || | ||||| | || || ||||| ||||| |||
Sbjct 2031762 TGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 2031703
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || |||| ||||| ||||| ||||||||
Sbjct 2031702 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031671
Score = 138 bits (152), Expect = 3e-27
Identities = 145/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || |||||||| ||||| | || || || ||||||
Sbjct 2030744 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAG 2030685
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || | || || ||||| || || |||||||| |||||||| ||
Sbjct 2030684 ATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGATTTTAGCTTTCACATTC 2030625
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||||| | || || ||||| ||||| ||||| || ||||| ||||| ||
Sbjct 2030624 TCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTCACA 2030565
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 2030564 AAGATCTGCAT 2030554
Score = 129 bits (142), Expect = 1e-24
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | || |||||||| || || | || || || ||||||
Sbjct 2031633 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAG 2031574
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| ||| | || || ||||| || |||||||| || || || |||||
Sbjct 2031573 ATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTC 2031514
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || ||||| | ||||| ||||| || ||||| |||||||||
Sbjct 2031513 TCAATGGTGTCACTGGGCTCAACTTCCAAAGTGATGGTCTTGCCAGTCAGCGTCTTGACG 2031454
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 2031453 AAGATCTGCAT 2031443
Score = 111 bits (122), Expect = 4e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || |||||||| ||||| | || || || || |||
Sbjct 2031405 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCAAAG 2031346
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || | || || ||||| || |||||||| || || || |||||
Sbjct 2031345 ATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTC 2031286
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||||| | ||||| | || || ||||| ||||| || || || |||| ||||| ||
Sbjct 2031285 TCTATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTCAAGGTCTTCAC 2031227
>seq1581
Length=2594311
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| || ||||| | ||| ||||| ||||| || ||||| | || ||||| || |||
Sbjct 1373186 AGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCATCT 1373245
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| | ||||| || ||||||||||| | ||| || | || || |||||||| |||
Sbjct 1373246 TCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 1373305
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
||||| || || || ||||| || || | ||||| | || || || || ||||| |||
Sbjct 1373306 TGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGATGGTC 1373365
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || ||||| || ||||||||
Sbjct 1373366 TTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1373397
>seq20611
Length=922441
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324
|| ||||| | ||| ||||||||||| || ||||| | | ||||| || |||||
Sbjct 520335 ACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACCATCTTCC 520394
Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384
| ||||| || || ||||||| | ||| || | || || |||||||||||||||
Sbjct 520395 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCTTCTTTATCCTGG 520454
Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444
|| || || || ||||| || || | || || | || || || || ||||| |||||
Sbjct 520455 ATCTTAGCCTTGACGTTCTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGTCTTG 520514
Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| |||| ||||||||||| ||||||||
Sbjct 520515 CCTGTCAAGGTCTTGACGAAGATCTGCAT 520543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178359374662396
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