Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq77944 102 1e-16
seq3398 102 1e-16
seq19301 91.5 2e-13
seq16819 86.0 7e-12
seq6006 86.0 7e-12
seq11199 84.2 3e-11
>seq77944
Length=846
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558
|||||||||| |||||||||| |||||| || ||||| || | |||||||||||
Sbjct 148 CTCATCCTTACTGGTGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCC 89
Query 114559 CAAGTTCTTTTGATTTGACTTTGTG-TTACACGCATCCTTGTAAAGCATGTATGGCGTCC 114617
|| ||||| || || | |||| | || || |||||||||||||||||||| || || |
Sbjct 88 CAGGTTCTGCTGGTT-GCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGC 30
Query 114618 CCGTCTCCGTTTGGGACT 114635
| ||||| || || ||||
Sbjct 29 CGGTCTCTGTCTGAGACT 12
>seq3398
Length=854497
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558
|||||||||| |||||||||| |||||| || ||||| || | |||||||||||
Sbjct 23557 CTCATCCTTACTGGTGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCC 23498
Query 114559 CAAGTTCTTTTGATTTGACTTTGTG-TTACACGCATCCTTGTAAAGCATGTATGGCGTCC 114617
|| ||||| || || | |||| | || || |||||||||||||||||||| || || |
Sbjct 23497 CAGGTTCTGCTGGTT-GCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGC 23439
Query 114618 CCGTCTCCGTTTGGGACT 114635
| ||||| || || ||||
Sbjct 23438 CGGTCTCTGTCTGAGACT 23421
Score = 82.4 bits (90), Expect = 9e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| ||| | || || ||||| | |||||||||| |||| ||| || || ||||||
Sbjct 30036 TAGATGTTGCTAGTATACGGCTCGATTGACTCATTGTTGCCCAGGATCTGAGCAGTGGAG 29977
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 114036
|| ||||||||||| |||| || || ||||||||
Sbjct 29976 GCAGTGGGCATGGGAGCCAGCAGCAGACTGTTACG 29942
>seq19301
Length=1192634
Score = 91.5 bits (100), Expect = 2e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| ||| | ||||||||||||| |||||||||| |||| ||| || || ||||||
Sbjct 381083 TAGATGTTGCTAGTGTATGGCTCAATTGACTCATTGTTTCCCAGGATCTGAGCAGTGGAG 381142
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 114036
|| |||||||| || |||| || || ||||||||
Sbjct 381143 GCAGTGGGCATAGGAGCCAGCAGCAGACTGTTACG 381177
Score = 89.7 bits (98), Expect = 6e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558
|||||||||| |||||||||| ||| || || ||||| || | || ||||||||
Sbjct 383136 CTCATCCTTACTGGTGTACTCTACAATCTCTGTGCACAAGTTACTGCATTTGATGGTGCC 383195
Query 114559 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 114618
|| ||||| || || ||| ||| || ||||||||||| |||||||| || || ||
Sbjct 383196 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGTAGGGTGTGCC 383255
Query 114619 CGTCTCCGTTTGGGACT 114635
||||| || || ||||
Sbjct 383256 GGTCTCTGTCTGAGACT 383272
>seq16819
Length=1945512
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125
|||| || | | ||| |||||||| |||||| ||||| |||||||| || | |||||
Sbjct 739164 CCTCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCT 739105
Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175
| | ||||||||| | | ||| || || || ||||||||||| ||||||
Sbjct 739104 TTAGCCAGAAAATAGAAGCAAAAGACCCAGAAAAGAAGATTCCTTCCACA 739055
>seq6006
Length=139621
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125
|||| || | | ||| |||||||| |||||| ||||| |||||||| || | |||||
Sbjct 86163 CCTCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCT 86222
Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175
| | ||||||||| | | ||| || || || ||||||||||| ||||||
Sbjct 86223 TTAGCCAGAAAATAGAAGCAAAAGACCCGGAAAAGAAGATTCCTTCCACA 86272
>seq11199
Length=1679328
Score = 84.2 bits (92), Expect = 3e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125
|||| || | | |||||||||||| ||| || ||||| ||||| || || | ||||
Sbjct 643754 CCTCATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCTCTTTTCT 643695
Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174
|||||||| | || ||| |||||| || ||||||||||| || |||||
Sbjct 643694 TCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCCAC 643646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596713819360560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |