Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq77944 102 1e-16 seq3398 102 1e-16 seq19301 91.5 2e-13 seq16819 86.0 7e-12 seq6006 86.0 7e-12 seq11199 84.2 3e-11 >seq77944 Length=846 Score = 102 bits (112), Expect = 1e-16 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558 |||||||||| |||||||||| |||||| || ||||| || | ||||||||||| Sbjct 148 CTCATCCTTACTGGTGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCC 89 Query 114559 CAAGTTCTTTTGATTTGACTTTGTG-TTACACGCATCCTTGTAAAGCATGTATGGCGTCC 114617 || ||||| || || | |||| | || || |||||||||||||||||||| || || | Sbjct 88 CAGGTTCTGCTGGTT-GCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGC 30 Query 114618 CCGTCTCCGTTTGGGACT 114635 | ||||| || || |||| Sbjct 29 CGGTCTCTGTCTGAGACT 12 >seq3398 Length=854497 Score = 102 bits (112), Expect = 1e-16 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558 |||||||||| |||||||||| |||||| || ||||| || | ||||||||||| Sbjct 23557 CTCATCCTTACTGGTGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCC 23498 Query 114559 CAAGTTCTTTTGATTTGACTTTGTG-TTACACGCATCCTTGTAAAGCATGTATGGCGTCC 114617 || ||||| || || | |||| | || || |||||||||||||||||||| || || | Sbjct 23497 CAGGTTCTGCTGGTT-GCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGC 23439 Query 114618 CCGTCTCCGTTTGGGACT 114635 | ||||| || || |||| Sbjct 23438 CGGTCTCTGTCTGAGACT 23421 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | || || ||||| | |||||||||| |||| ||| || || |||||| Sbjct 30036 TAGATGTTGCTAGTATACGGCTCGATTGACTCATTGTTGCCCAGGATCTGAGCAGTGGAG 29977 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 114036 || ||||||||||| |||| || || |||||||| Sbjct 29976 GCAGTGGGCATGGGAGCCAGCAGCAGACTGTTACG 29942 >seq19301 Length=1192634 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||||||||||| |||||||||| |||| ||| || || |||||| Sbjct 381083 TAGATGTTGCTAGTGTATGGCTCAATTGACTCATTGTTTCCCAGGATCTGAGCAGTGGAG 381142 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 114036 || |||||||| || |||| || || |||||||| Sbjct 381143 GCAGTGGGCATAGGAGCCAGCAGCAGACTGTTACG 381177 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558 |||||||||| |||||||||| ||| || || ||||| || | || |||||||| Sbjct 383136 CTCATCCTTACTGGTGTACTCTACAATCTCTGTGCACAAGTTACTGCATTTGATGGTGCC 383195 Query 114559 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 114618 || ||||| || || ||| ||| || ||||||||||| |||||||| || || || Sbjct 383196 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGTAGGGTGTGCC 383255 Query 114619 CGTCTCCGTTTGGGACT 114635 ||||| || || |||| Sbjct 383256 GGTCTCTGTCTGAGACT 383272 >seq16819 Length=1945512 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 |||| || | | ||| |||||||| |||||| ||||| |||||||| || | ||||| Sbjct 739164 CCTCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCT 739105 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175 | | ||||||||| | | ||| || || || ||||||||||| |||||| Sbjct 739104 TTAGCCAGAAAATAGAAGCAAAAGACCCAGAAAAGAAGATTCCTTCCACA 739055 >seq6006 Length=139621 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 |||| || | | ||| |||||||| |||||| ||||| |||||||| || | ||||| Sbjct 86163 CCTCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCT 86222 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175 | | ||||||||| | | ||| || || || ||||||||||| |||||| Sbjct 86223 TTAGCCAGAAAATAGAAGCAAAAGACCCGGAAAAGAAGATTCCTTCCACA 86272 >seq11199 Length=1679328 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 |||| || | | |||||||||||| ||| || ||||| ||||| || || | |||| Sbjct 643754 CCTCATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCTCTTTTCT 643695 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 |||||||| | || ||| |||||| || ||||||||||| || ||||| Sbjct 643694 TCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCCAC 643646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596713819360560