Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq46 114 1e-20
seq13143 109 5e-19
seq6006 91.5 1e-13
seq77944 89.7 5e-13
seq3398 89.7 5e-13
seq1581 87.8 2e-12
seq16819 86.0 6e-12
seq20611 84.2 2e-11
>seq46
Length=2207375
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
|||||| || | ||||| || | ||| | | | |||||||| || ||||||||||||
Sbjct 2031898 GCCGCCACGAAGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2031839
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || || || || || || ||||| | |||| |||||||| ||||| |||||
Sbjct 2031838 CAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGG 2031779
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| |||||| ||| | | || | ||||||| | | ||| ||
Sbjct 2031778 AATGCCTTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAAC 2031719
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| || | || || ||||||| || || || || ||||||||
Sbjct 2031718 CTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031671
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || || || || || || || || |
Sbjct 2030747 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCG 2030688
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| ||||| ||||| || ||||| ||||| |||||| ||| |
Sbjct 2030687 AAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGATTTTAGCTTTCACA 2030628
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||||| | | ||| ||||||| || | || || |||||||| || ||
Sbjct 2030627 TTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTC 2030568
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 2030567 ACAAAGATCTGCAT 2030554
Score = 98.7 bits (108), Expect = 1e-15
Identities = 132/184 (72%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || || || || || || ||||| | |
Sbjct 2031408 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCA 2031349
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| ||||| ||||| || ||||| ||||| ||| || || |
Sbjct 2031348 AAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACG 2031289
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||||| | | ||| ||||||| || | ||||||||||||| || ||
Sbjct 2031288 TTCTCTATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTCAAGGTCTTC 2031229
Query 138601 ACAA 138604
||||
Sbjct 2031228 ACAA 2031225
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || || || || || || || || || |
Sbjct 2030975 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCG 2030916
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| ||||| ||||| || ||||| || || ||| || || |
Sbjct 2030915 AAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACG 2030856
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||||| | | ||| ||||||| || | || || |||||||| || ||
Sbjct 2030855 TTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTG 2030796
Query 138601 ACAAAAATCTGCATGGCT 138618
|| || ||||||||| ||
Sbjct 2030795 ACGAAGATCTGCATGCCT 2030778
Score = 89.7 bits (98), Expect = 5e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 138398 AACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCG 138457
|||||| || | ||| | | | ||||| || || |||||||||||| || ||| ||
Sbjct 2031226 AACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTC 2031167
Query 138458 AGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTT 138517
|| || | ||||| |||| |||| | |||||| ||||| ||||| || ||||| |
Sbjct 2031166 CATCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCT 2031107
Query 138518 TGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577
| || ||| || || | | || | ||||||| | | ||| ||||||| || |
Sbjct 2031106 TATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGA 2031047
Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || ||||||| || || || || ||||||||
Sbjct 2031046 TGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031010
>seq13143
Length=1991197
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || || | ||||| || | ||| | | | |||||||| || ||||||||||||
Sbjct 1626615 GCCCCCACGAAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1626556
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || || || || || || || || | |||| |||||||| ||||| |||||
Sbjct 1626555 CAGCGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGG 1626496
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| || || | | || | ||||||| | | ||| ||
Sbjct 1626495 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAAC 1626436
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| || | || || |||||||| ||||| ||||| ||||||||
Sbjct 1626435 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 1626388
>seq6006
Length=139621
Score = 91.5 bits (100), Expect = 1e-13
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 52764 AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAG 52823
||||| ||||| || ||| | |||||||| | ||||||||||||||||| || ||||||
Sbjct 85496 AATCCTTTTGACTTCATGGAGAACATTTCCTTGGAGGGCAAGACCAACTTCTTTGAGAAG 85437
Query 52824 CGAGTCGGCGAGTATAAGCG 52843
|||||||||||||| ||||
Sbjct 85436 CGAGTCGGCGAGTACCAGCG 85417
>seq77944
Length=846
Score = 89.7 bits (98), Expect = 5e-13
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699
|||||| || || || | ||| | ||| |||||||| ||| ||||| || ||||| |
Sbjct 134 TGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCCAGGTTCTGCTGGT 75
Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 153751
|||||||||| ||||| || || ||| | |||||||| ||| |||||||||
Sbjct 74 TGCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGCCGGTCTC 23
>seq3398
Length=854497
Score = 89.7 bits (98), Expect = 5e-13
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699
|||||| || || || | ||| | ||| |||||||| ||| ||||| || ||||| |
Sbjct 23543 TGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCCAGGTTCTGCTGGT 23484
Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 153751
|||||||||| ||||| || || ||| | |||||||| ||| |||||||||
Sbjct 23483 TGCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGCCGGTCTC 23432
>seq1581
Length=2594311
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 138399 ACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA 138458
||||| || | ||| | | | ||||| || || ||||||||||| || || ||
Sbjct 1373182 ACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACC 1373241
Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518
|| || || ||||| || | |||| || | ||| ||||| || || || ||||||||
Sbjct 1373242 ATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTT 1373301
Query 138519 GTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578
||| ||| ||| || | | || | ||||||| | | ||| ||||| | || |
Sbjct 1373302 GTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGAT 1373361
Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || ||||| || ||||| ||||| ||||||||
Sbjct 1373362 GGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1373397
>seq16819
Length=1945512
Score = 86.0 bits (94), Expect = 6e-12
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 52764 AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAG 52823
||||| ||||| || ||| | |||||||| | ||||||||||||||||| || ||||||
Sbjct 739932 AATCCTTTTGACTTCATGGAGAACATTTCCTTGGAGGGCAAGACCAACTTCTTTGAGAAG 739991
Query 52824 CGAGTCGGCGAGTATAAGCG 52843
||||| |||||||| ||||
Sbjct 739992 CGAGTGGGCGAGTACCAGCG 740011
>seq20611
Length=922441
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| || || ||||||||||| || || || || || || ||||| |||| |
Sbjct 520578 GACTCTTTCTGGATGTTGTAGTCAGACAATGTGCGGCCATCTTCCAGCTGTTTGCCGGCA 520637
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | | ||| ||||| || || || ||||||||||| ||| || || |
Sbjct 520638 AAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTTAGCCTTGACG 520697
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | ||| ||||| | || | || |||||||| || |||||
Sbjct 520698 TTCTCAATTGTGTCGCTTGGCTCAACCTCAAGGGTGATGGTCTTACCAGTGAGGGTTTTG 520757
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 520758 ACAAAGATCTGCAT 520771
Score = 82.4 bits (90), Expect = 8e-11
Identities = 150/220 (68%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 138399 ACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA 138458
|||||| || | ||| | | | ||||| ||||| ||||||||||| || || ||
Sbjct 520328 ACGCAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACC 520387
Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518
|| || || ||||| |||| | |||| | | ||| ||||| || || |||||||||||
Sbjct 520388 ATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCTTCTTT 520447
Query 138519 GTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578
|| ||| || || | | || | |||||| | | ||| ||||| | || |
Sbjct 520448 ATCCTGGATCTTAGCCTTGACGTTCTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGAT 520507
Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618
|| || || |||| || || || || ||||||||| ||
Sbjct 520508 GGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCATGCCT 520547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495730890563040
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