Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1581 107 2e-18
seq46 93.3 4e-14
seq20611 82.4 7e-11
seq13143 82.4 7e-11
>seq1581
Length=2594311
Score = 107 bits (118), Expect = 2e-18
Identities = 165/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| | ||| | || ||| ||||||| || || || || ||||| || || || |
Sbjct 1373171 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCA--G 1373228
Query 45174 ACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
|| || | || ||| |||| ||||| || ||| | |||| | |||||||| || |
Sbjct 1373229 ACAGTGTGCGACCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGG 1373288
Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290
||||||||||||| || || || ||| |||| || | || | ||||||| | ||||
Sbjct 1373289 GAATGCCTTCTTTGTCCTGGATCTTTGCCTTGA-CGTTCTCAATGGTGTCGCTTGGCTCG 1373347
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || | || ||||| || || ||||| ||||| || ||||||
Sbjct 1373348 ACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCATC 1373398
>seq46
Length=2207375
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| | ||| | | ||| || || || || || ||||| ||||| || || |||
Sbjct 2030783 ATGCCTCCCCTGAGGCGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 2030724
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| |||| || || || ||| | |||| || |||||||| ||
Sbjct 2030723 GACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGA 2030664
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||||||||| || ||||| ||||| ||| | || | ||||||| | |||
Sbjct 2030663 GGAATGCCTTCCTTGTCTTGGATTTTAGCTTTCACATTCTCAATGGTGTCGCTGGGCTCA 2030604
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || | || ||||| || || || || ||||| || ||||||
Sbjct 2030603 ACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTCACAAAGATCTGCATC 2030553
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189
|| ||||| || || || || || ||||| || || ||| ||| | | | ||| |
Sbjct 2031218 ACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCG--GACAGAGTGCGTCCATCTT 2031161
Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249
|||| ||||| || ||| | ||||| || |||||||| || ||||||||||| ||||| |
Sbjct 2031160 CCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCT 2031101
Query 45250 GAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308
| || || |||| || | || | ||||||| | ||| || ||||| || | ||
Sbjct 2031100 GGATCTTGGCCTTGA-CGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 2031042
Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || | || || || || || |||||
Sbjct 2031041 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031010
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || || || | || || ||||| || || || ||||| ||||| || || |||
Sbjct 2031897 CCGCCACGAAGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2031838
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| ||| |||| || || || ||| | |||| || |||||||| || |||
Sbjct 2031837 AGGGTGCGTCCATCTTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGA 2031778
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|||||||| || ||||| ||||| ||||| || | ||||||| | ||| ||
Sbjct 2031777 ATGCCTTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACC 2031718
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || | || ||||| || | || || || || || |||||
Sbjct 2031717 TCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031671
>seq20611
Length=922441
Score = 82.4 bits (90), Expect = 7e-11
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| | ||| | |||||| ||||||| || || || |||||||| || || || |
Sbjct 520317 CCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCA--G 520374
Query 45174 ACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
|| | | || ||| |||| ||||| || || | ||||| | |||||||| || |
Sbjct 520375 ACAATGTGCGACCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGG 520434
Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290
|||| ||||||||||| || || || |||| || | || | |||||| | |||
Sbjct 520435 GAATACCTTCTTTATCCTGGATCTTAGCCTTGA-CGTTCTCAATGGTGTCACTTGGCTCA 520493
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | || ||||| || | || || || || || |||||
Sbjct 520494 ACCTCAAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 520543
>seq13143
Length=1991197
Score = 82.4 bits (90), Expect = 7e-11
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || || || | || || |||||||| || || ||||| ||||| || || ||| |
Sbjct 1626614 CCCCCACGAAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG--G 1626557
Query 45174 ACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
|| | | | ||| || | || || || ||| | |||| || |||||||| || |
Sbjct 1626556 ACAGCGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAG 1626497
Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290
|||||||||| || || || || || || | || | || | ||||||| | |||
Sbjct 1626496 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTCTCAATGGTGTCGCTGGGCTCA 1626438
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| || | || ||||| || || ||||| ||||| || |||||
Sbjct 1626437 ACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 1626388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451519093272720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |