Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq20611 86.0 4e-12 >seq20611 Length=922441 Score = 86.0 bits (94), Expect = 4e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 39504 ACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTC 39563 |||||| || | |||||||||| ||||| || || || || || | ||| ||| | Sbjct 520556 ACGCAGCACAAGATGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGACAATGTGCGGCC 520615 Query 39564 ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTT 39623 ||| |||| ||||| ||| |||| || || | |||||| || | ||| | ||||||||| Sbjct 520616 ATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTT 520675 Query 39624 GTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTT---TCCACGTCCAAAGT 39680 ||| || || || | || | | ||||| ||||| || || || | || Sbjct 520676 GTCCTGGATCTTAGCCTTGACGTTCTCAATTGTGT---CGCTTGGCTCAACCTCAAGGGT 520732 Query 39681 AATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || ||||| || | ||||| || ||||||||||| Sbjct 520733 GATGGTCTTACCAGTGAGGGTTTTGACAAAGATCTGCAT 520771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347006859512306