Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1581 152 5e-32
seq46 147 2e-30
seq13143 141 9e-29
seq20611 118 1e-21
>seq1581
Length=2594311
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || ||||| ||||| ||||| ||||||||| | || |||||| | | |
Sbjct 1373397 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCAAGC 1373338
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | ||| |||| |||||||| || |||||| | |||||
Sbjct 1373337 GACACCATTGAGAACG-TCAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCA 1373279
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | ||| |||||||||||||| || | ||||| || ||||||||
Sbjct 1373278 GCAGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATGGTCGCACACTGTCTGACTACAA 1373219
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| || || | || ||||| ||||||||||| | || || ||
Sbjct 1373218 CATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGGGGAGG 1373171
>seq46
Length=2207375
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| || ||||| ||||||||| |||| || ||| ||| |
Sbjct 2030782 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 2030841
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| || || || || ||||| | |||||
Sbjct 2030842 GACACCATTGAGAACG-TCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCA 2030900
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| ||||| |||||||| || | |||||||| |||||||||
Sbjct 2030901 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAA 2030960
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| | || || || ||||||| ||| ||||||| ||
Sbjct 2030961 CATCCAGAAGGAGTCCACTCTCCACCTGGTGCTCCGTCTGAGAGGTGG 2031008
Score = 143 bits (158), Expect = 3e-29
Identities = 171/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || || || || ||||| || ||||| ||||||||| |||| || ||| |
Sbjct 2030550 AAAGATGCAGATCTTTGTGAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCC 2030609
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|| ||||| | | | | | |||| ||||||| ||||| || || ||||| | ||
Sbjct 2030610 CAGCGACACCATTGAGAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGA 2030669
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| || || | ||| ||||| |||||||| || | |||||||| ||||||
Sbjct 2030670 CCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTA 2030729
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||| ||||| | || || || ||||||| || | || || |||
Sbjct 2030730 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTGCTCCGCCTCAGGGGAGGC 2030781
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| ||||||||| |||| || ||| ||| |
Sbjct 2031671 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 2031730
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | |||| ||||||| ||||| || || ||||| | |||||
Sbjct 2031731 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGACCAG 2031790
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| || || |||||||| || | |||||||| ||||||||||
Sbjct 2031791 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 2031850
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| | || || ||| | || |||||| | | ||||||
Sbjct 2031851 ATCCAGAAGGAGTCCACCCTCCATCTCGTCCTGCGTCTTCGTGGCGGC 2031898
Score = 129 bits (142), Expect = 6e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| || ||||| |||||||| | || || ||| |||
Sbjct 2031443 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACTTTGGAAGTTGAGCCCAGT 2031502
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || ||||| | || ||
Sbjct 2031503 GACACCATTGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCA 2031561
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| ||||| |||||||| || | |||||||| ||||||||
Sbjct 2031562 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGACGCACCCTGTCTGACTACAA 2031621
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| | || || || ||||||| ||| ||||||| ||
Sbjct 2031622 CATCCAGAAGGAGTCCACTCTCCACCTGGTGCTCCGTCTGAGAGGTGG 2031669
Score = 122 bits (134), Expect = 9e-23
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGT-GCAAACGCTTAAAGA 38326
|| || |||||||||||| |||| || ||| ||| ||||| | | | |||| | || |
Sbjct 2031239 ACTGGTAAAACCATCACCCTCGAGGTTGAGCCCAGCGACACCATAGAGAACG-TCAAGGC 2031297
Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386
|| |||| ||||| || || ||||| | ||||| ||||| || || | || || ||
Sbjct 2031298 CAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGTCTGATCTTTGCTGGTAA 2031357
Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
|||||||| || | |||||||| ||||||||||||||| ||||| | || || ||
Sbjct 2031358 GCAGCTGGAAGATGGACGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACTCTCCA 2031417
Query 38447 TTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| ||| ||||||| ||
Sbjct 2031418 CCTGGTGCTCCGTCTGAGAGGTGG 2031441
Score = 116 bits (128), Expect = 4e-21
Identities = 158/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| ||||||||| |||| || ||| ||| |
Sbjct 2031010 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 2031069
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| || || || || ||||| | |||||
Sbjct 2031070 GACACCATTGAGAACG-TCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCA 2031128
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||| ||||||||| |||| || | ||||| || |||||||||
Sbjct 2031129 GCAGCGTTTGATCTTCGCCGGCAAACAGTTGGAAGATGGACGCACTCTGTCCGACTACAA 2031188
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTT 38460
|||||| || || | || || ||| | || |||||||
Sbjct 2031189 CATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTT 2031226
>seq13143
Length=1991197
Score = 141 bits (156), Expect = 9e-29
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||||| || ||||| || ||||| ||||||||| |||| || ||| |
Sbjct 1624590 AAAGATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCC 1624649
Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
|| ||||| | | | |||| | |||| ||||||| ||||| || || || || | |
Sbjct 1624650 CAGCGACACCATTGAGAACG-TCAAAGCTAAAATCCAAGACAAGGAAGGCATCCCTCCTG 1624708
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||||| || || | || ||||| ||| |||| || | ||||| || || |
Sbjct 1624709 ACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGTTGGAAGATGGACGCACGCTGTCTGATT 1624768
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||| |||||| | || || ||| | || |||||| ||||||| ||
Sbjct 1624769 ACAACATCCAGAAGGAATCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGG 1624820
Score = 132 bits (146), Expect = 5e-26
Identities = 161/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || ||||| || || ||||| ||||||||| |||| || ||| ||| |
Sbjct 1626388 ATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1626447
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || ||||| | |||||
Sbjct 1626448 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCA 1626506
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| ||||| ||||| || || | ||||| || |||||||||
Sbjct 1626507 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGATGGACGCACGCTGTCCGACTACAA 1626566
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || |||||| | || ||||||
Sbjct 1626567 CATCCAGAAGGAGTCCACCCTGCATCTCGTCCTGCGT 1626603
Score = 89.7 bits (98), Expect = 5e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 38322 AAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCG 38381
|||| ||||||| ||||| || || || || | ||||| ||||| || || | ||
Sbjct 1625463 AAAGCTAAAATCCAAGACAAGGAAGGCATCCCTCCTGACCAGCAGCGTCTGATCTTTGCT 1625522
Query 38382 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACG 38441
||||| ||| |||| || | ||||| || || ||||||||||| |||||| | ||
Sbjct 1625523 GGCAAGCAGTTGGAAGATGGACGCACGCTGTCTGATTACAACATCCAGAAGGAATCCACC 1625582
Query 38442 CTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| ||| | || |||||| ||||||| ||
Sbjct 1625583 CTCCATCTTGTCCTGCGTCTGAGAGGTGG 1625611
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| || || || || ||||| | ||||| ||||| | || | ||| ||||||
Sbjct 1626244 AAGATCCAAGATAAGGAAGGCATTCCTCCTGACCAGCAGCGTTTGATCTTCGCCGGCAAA 1626303
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
||| |||| || | ||||| || ||||||||||||||| || || | || || |||
Sbjct 1626304 CAGTTGGAAGATGGACGCACTCTGTCCGACTACAACATCCAGAAAGAGTCCACCCTCCAT 1626363
Query 38448 TTGGTGCTGCGTTTGAGAGGCGG 38470
| || |||||| ||||||| ||
Sbjct 1626364 CTTGTCCTGCGTCTGAGAGGTGG 1626386
>seq20611
Length=922441
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || ||||| ||||| || || ||||||||| | || || ||| | | |
Sbjct 520771 ATGCAGATCTTTGTCAAAACCCTCACTGGTAAGACCATCACCCTTGAGGTTGAGCCAAGC 520712
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| |||||||| || |||||| | |||||
Sbjct 520711 GACACAATTGAGAACG-TCAAGGCTAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCA 520653
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || |||||||||||||| || | ||||| | ||||||||
Sbjct 520652 GCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACATTGTCTGACTACAA 520593
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| || || | || ||||| | ||||||||| | || || |||
Sbjct 520592 CATCCAGAAAGAGTCCACTTTGCATCTTGTGCTGCGTCTCAGGGGAGGC 520544
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| ||||||||| | || || ||| | |
Sbjct 520543 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCAAGT 520484
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| || ||||| || |||||| | |||||
Sbjct 520483 GACACCATTGAGAACG-TCAAGGCTAAGATCCAGGATAAAGAAGGTATTCCCCCTGACCA 520425
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || |||||||||||||| || | ||||| | ||||||||
Sbjct 520424 GCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGTCGCACATTGTCTGACTACAA 520365
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||| || | || ||||| ||||| ||||| | || || ||
Sbjct 520364 CATCCAAAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAGGGGAGG 520317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499637102426880
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