Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq3503 156 2e-32
seq1483 102 3e-16
seq5900 95.1 5e-14
seq6022 91.5 6e-13
seq46 89.7 2e-12
seq3406 84.2 9e-11
>seq3503
Length=819951
Score = 156 bits (172), Expect = 2e-32
Identities = 465/712 (65%), Gaps = 13/712 (2%)
Strand=Plus/Plus
Query 450899 TCTGTCAAAAAAGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTT 450958
|||| ||| ||| || ||||||||||| || || ||||||| || ||||| || ||
Sbjct 329825 TCTGCAAAAGGAGTTGCTATTGGAATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTG 329884
Query 450959 TACCAAAATGGAAATGTAGAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTC 451017
| || ||||||| || ||||| || || |||||||| || | || |||| || || |
Sbjct 329885 TTTCAGCATGGAAAAGTGGAAATCATCGCCAATGACCAGGGGAACA-GAACAACACC--C 329941
Query 451018 ATGGGTAAGTT----TTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGG 451073
| | || ||| |||| || | || || || | || | || |||||| ||
Sbjct 329942 A--GCTATGTTGCCTTTACAGACACTGAGAGGCTCATTGGAGATGCAGCTAAAAACCAGG 329999
Query 451074 TAAATTCAAATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATG 451133
| || |||| | ||| || | ||||||||| | | |||||| | | || ||
Sbjct 330000 TGGCCATGAACCCCAACAGCACCGTGTTTGATGCTAAGAGGCTGATTGGCAGAAAGTTTG 330059
Query 451134 ATGATGATACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAG 451193
|||| ||| || || | || || |||| | || || | | | ||
Sbjct 330060 ATGACCCAGTTGTGCAGTCTGACATGAAGCACTGGTCTTTCCAAGTCGTCAGTGATGGAG 330119
Query 451194 GAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAA 451253
||||||| | ||||||| |||| ||||| |||| || || ||| |||||||| |
Sbjct 330120 GAAAGCCAAAAGTTCAAGTTGATTACAAAGGAGAAAACAAGACGTTTTACCCTGAAGAGA 330179
Query 451254 TTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG 451313
|||| |||||||| || || ||||| || | || ||| ||| | || |
Sbjct 330180 TTTCCTCTATGGTCCTGGTGAAGATGAAGGAGATTGCTGAAGCTTATCTGGGGCAGAAGG 330239
Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373
| || ||||||| || || ||||| || ||||||||||| | || ||||||| ||||
Sbjct 330240 TGACGAATGCAGTTATCACAGTTCCTGCCTATTTCAATGACTCCCAGAGGCAAGCGACTA 330299
Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433
|||| || ||| || ||||| | ||||| || |||| || || || || ||||| |
Sbjct 330300 AAGACGCTGGAGTAATCGCTGGACTGAATGTCCTCAGAATCATCAACGAGCCCACAGCTG 330359
Query 451434 CTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTAT 451493
| || | || || || || | ||| |||| |||| || | | | | |
Sbjct 330360 CAGCCATTGCCTACGGCCTTGACAAAAGCAAAGCTTCAGAGCGCAA---TGTCCTGATCT 330416
Query 451494 TTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTG 451553
|||| | || ||||| || |||| || | || | ||||||||||| | ||||
Sbjct 330417 TTGACCTGGGAGGAGGCACCTTTGATGTGTCCATCCTGACCATTGAAGATGGCATCTTTG 330476
Query 451554 AAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
| || ||||| || ||| || |||||||| || || || || |||| ||
Sbjct 330477 AGGTGAAGGCCACAGCTGGAGACACTCATCTGGGTGGAGAGGACTTTGACAA 330528
>seq1483
Length=869106
Score = 102 bits (112), Expect = 3e-16
Identities = 343/532 (64%), Gaps = 8/532 (2%)
Strand=Plus/Minus
Query 450910 AGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGG 450969
||| || ||||| ||||| || || ||||||| || |||||||| || | || ||||
Sbjct 523763 AGTTGCTATTGGGATTGACCTGGGCACCACCTACTCCTGTGTAGGGGTATTTCAGCATGG 523704
Query 450970 AAATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTT- 451028
||| || || || ||||| |||||||| ||| |||| || || || | || ||
Sbjct 523703 AAAAGTGGAGATCATAGCCAATGACCAGGGAAACAGAACAACACC--CA--GCTATATTG 523648
Query 451029 ---TTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATG 451085
| || || | || || ||| |||| | || |||||| ||| ||
Sbjct 523647 CCTTCACAGACACTGAGAGGCTTATAGGAGATGCAGCTAAAAACCAGGTGGCCATGAACC 523588
Query 451086 CCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTG 451145
|||| ||||| || | ||| ||||| | | || || | | || |||||| ||
Sbjct 523587 CCAACAACACCGTGTTTGACGCTAAGAGGCTGATCGGTAGAAAGTTTGATGACCCAGTTG 523528
Query 451146 TACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATA 451205
| || || | || || |||| || || | | | ||| ||||| |
Sbjct 523527 TGCAGTCTGACATGAAGCACTGGTCTTTCAGAGTTGTCAGTGATGGAGGGAAGCCTAAGG 523468
Query 451206 TTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265
| || || | |||||||| ||||| || | ||| ||||| ||||| || || ||||
Sbjct 523467 TACAGGTTGAGTATAAAGGAGAAACCAAGTCATTTTACCCTGAGGAAATCTCTTCCATGG 523408
Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAG 451325
| || || ||||| || | ||||| || | || | || || |||| |
Sbjct 523407 TCCTGGTGAAGATGAAGGAGATTGCAGAGGCTTACCTGGGACATAAGGTGACAAATGCTG 523348
Query 451326 TAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGAC 451385
| ||||| ||||| || ||||||||||| | || ||||||| |||||||| || |||
Sbjct 523347 TCATTACAGTTCCTGCCTATTTCAATGACTCCCAGAGGCAAGCGACTAAAGACGCTGGAG 523288
Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437
|| ||||| | ||||| || |||| || || || || ||||| || ||
Sbjct 523287 TAATCGCTGGGCTGAATGTCCTGAGAATCATCAACGAGCCCACAGCTGCAGC 523236
>seq5900
Length=2632787
Score = 95.1 bits (104), Expect = 5e-14
Identities = 79/97 (81%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977
|||| |||||||| || ||||||| || ||||||||||||| |||| ||||||| || |
Sbjct 337882 TTGGTATTGATCTCGGGACCACCTACTCCTGTGTAGGTGTTTTCCAACATGGAAAAGTTG 337941
Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCC 451014
|||| || || |||||||||||| || || |||||
Sbjct 337942 AAATCATCGCTAATGACCAAGGAAACCGGACCACTCC 337978
>seq6022
Length=3101233
Score = 91.5 bits (100), Expect = 6e-13
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977
|||| |||||||| || ||||||| || ||||||||||||| |||| ||||||| || |
Sbjct 2865597 TTGGTATTGATCTCGGGACCACCTACTCCTGTGTAGGTGTTTTCCAACATGGAAAAGTTG 2865656
Query 450978 AAATTATAGCAAATGACCAAGGA 451000
|||| || || ||||||||||||
Sbjct 2865657 AAATCATTGCTAATGACCAAGGA 2865679
>seq46
Length=2207375
Score = 89.7 bits (98), Expect = 2e-12
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || || || |||||||| || || || || || || ||||| |
Sbjct 2030554 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 2030613
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | | ||| ||||| ||||| |||||||| ||||||||||| ||
Sbjct 2030614 GACACCATTGAGAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGACCAG 2030673
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || ||| | || || || || ||||||||| | || || | || || ||
Sbjct 2030674 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 2030733
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
|| | ||||| | || || |||
Sbjct 2030734 ATCCAGAAGGAGTCCACTCTCCAC 2030757
Score = 87.8 bits (96), Expect = 7e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || ||||||| || || || || || || ||||| |
Sbjct 2031671 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 2031730
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | | ||| ||||| ||||| |||||||| ||||||||||| ||
Sbjct 2031731 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGACCAG 2031790
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || ||| | || || || || ||||||||| | || || | || || ||
Sbjct 2031791 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 2031850
Query 391230 ATTGATAAGGA 391240
|| | |||||
Sbjct 2031851 ATCCAGAAGGA 2031861
Score = 84.2 bits (92), Expect = 9e-11
Identities = 153/224 (68%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || |||||||| || || || || || || ||||| |
Sbjct 2030782 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 2030841
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | || || || || ||||||||||| ||||||||||| ||
Sbjct 2030842 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCAG 2030901
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || ||| | || || || || ||||||||| | || || | || || ||
Sbjct 2030902 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 2030961
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || || ||| | || | | ||||||||
Sbjct 2030962 ATCCAGAAGGAGTCCACTCTCCACCTGGTGCTCCGTCTGAGAGG 2031005
Score = 84.2 bits (92), Expect = 9e-11
Identities = 153/224 (68%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || |||||||| || || || ||| | || ||||| | |
Sbjct 2031443 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACTTTGGAAGTTGAGCCCAGT 2031502
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | || || || || || |||||||| ||||||||||||||
Sbjct 2031503 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 2031562
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || ||| | || || || || || |||||| | || || | || || ||
Sbjct 2031563 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGACGCACCCTGTCTGACTACAAC 2031622
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || || ||| | || | | ||||||||
Sbjct 2031623 ATCCAGAAGGAGTCCACTCTCCACCTGGTGCTCCGTCTGAGAGG 2031666
>seq3406
Length=495462
Score = 84.2 bits (92), Expect = 9e-11
Identities = 75/93 (81%), Gaps = 1/93 (1%)
Strand=Plus/Plus
Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426
||||| || || || ||||| ||||||||||| ||||| ||||| ||||||| || ||
Sbjct 17395 GCAACCAAGGACGCCGGACAGATTGCTGGTTTGAATGTGCTTCGTGTTATTAACGAGCCG 17454
Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459
|| || |||||| |||| || ||||| ||||||
Sbjct 17455 ACGGCTGCTGCTTTAGCCTACGGACT-GGAAAA 17486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1973549455105656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |