Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3503 156 2e-32 seq1483 102 3e-16 seq5900 95.1 5e-14 seq6022 91.5 6e-13 seq46 89.7 2e-12 seq3406 84.2 9e-11 >seq3503 Length=819951 Score = 156 bits (172), Expect = 2e-32 Identities = 465/712 (65%), Gaps = 13/712 (2%) Strand=Plus/Plus Query 450899 TCTGTCAAAAAAGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTT 450958 |||| ||| ||| || ||||||||||| || || ||||||| || ||||| || || Sbjct 329825 TCTGCAAAAGGAGTTGCTATTGGAATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTG 329884 Query 450959 TACCAAAATGGAAATGTAGAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTC 451017 | || ||||||| || ||||| || || |||||||| || | || |||| || || | Sbjct 329885 TTTCAGCATGGAAAAGTGGAAATCATCGCCAATGACCAGGGGAACA-GAACAACACC--C 329941 Query 451018 ATGGGTAAGTT----TTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGG 451073 | | || ||| |||| || | || || || | || | || |||||| || Sbjct 329942 A--GCTATGTTGCCTTTACAGACACTGAGAGGCTCATTGGAGATGCAGCTAAAAACCAGG 329999 Query 451074 TAAATTCAAATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATG 451133 | || |||| | ||| || | ||||||||| | | |||||| | | || || Sbjct 330000 TGGCCATGAACCCCAACAGCACCGTGTTTGATGCTAAGAGGCTGATTGGCAGAAAGTTTG 330059 Query 451134 ATGATGATACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAG 451193 |||| ||| || || | || || |||| | || || | | | || Sbjct 330060 ATGACCCAGTTGTGCAGTCTGACATGAAGCACTGGTCTTTCCAAGTCGTCAGTGATGGAG 330119 Query 451194 GAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAA 451253 ||||||| | ||||||| |||| ||||| |||| || || ||| |||||||| | Sbjct 330120 GAAAGCCAAAAGTTCAAGTTGATTACAAAGGAGAAAACAAGACGTTTTACCCTGAAGAGA 330179 Query 451254 TTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG 451313 |||| |||||||| || || ||||| || | || ||| ||| | || | Sbjct 330180 TTTCCTCTATGGTCCTGGTGAAGATGAAGGAGATTGCTGAAGCTTATCTGGGGCAGAAGG 330239 Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373 | || ||||||| || || ||||| || ||||||||||| | || ||||||| |||| Sbjct 330240 TGACGAATGCAGTTATCACAGTTCCTGCCTATTTCAATGACTCCCAGAGGCAAGCGACTA 330299 Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433 |||| || ||| || ||||| | ||||| || |||| || || || || ||||| | Sbjct 330300 AAGACGCTGGAGTAATCGCTGGACTGAATGTCCTCAGAATCATCAACGAGCCCACAGCTG 330359 Query 451434 CTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTAT 451493 | || | || || || || | ||| |||| |||| || | | | | | Sbjct 330360 CAGCCATTGCCTACGGCCTTGACAAAAGCAAAGCTTCAGAGCGCAA---TGTCCTGATCT 330416 Query 451494 TTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTG 451553 |||| | || ||||| || |||| || | || | ||||||||||| | |||| Sbjct 330417 TTGACCTGGGAGGAGGCACCTTTGATGTGTCCATCCTGACCATTGAAGATGGCATCTTTG 330476 Query 451554 AAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | || ||||| || ||| || |||||||| || || || || |||| || Sbjct 330477 AGGTGAAGGCCACAGCTGGAGACACTCATCTGGGTGGAGAGGACTTTGACAA 330528 >seq1483 Length=869106 Score = 102 bits (112), Expect = 3e-16 Identities = 343/532 (64%), Gaps = 8/532 (2%) Strand=Plus/Minus Query 450910 AGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGG 450969 ||| || ||||| ||||| || || ||||||| || |||||||| || | || |||| Sbjct 523763 AGTTGCTATTGGGATTGACCTGGGCACCACCTACTCCTGTGTAGGGGTATTTCAGCATGG 523704 Query 450970 AAATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTT- 451028 ||| || || || ||||| |||||||| ||| |||| || || || | || || Sbjct 523703 AAAAGTGGAGATCATAGCCAATGACCAGGGAAACAGAACAACACC--CA--GCTATATTG 523648 Query 451029 ---TTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATG 451085 | || || | || || ||| |||| | || |||||| ||| || Sbjct 523647 CCTTCACAGACACTGAGAGGCTTATAGGAGATGCAGCTAAAAACCAGGTGGCCATGAACC 523588 Query 451086 CCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTG 451145 |||| ||||| || | ||| ||||| | | || || | | || |||||| || Sbjct 523587 CCAACAACACCGTGTTTGACGCTAAGAGGCTGATCGGTAGAAAGTTTGATGACCCAGTTG 523528 Query 451146 TACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATA 451205 | || || | || || |||| || || | | | ||| ||||| | Sbjct 523527 TGCAGTCTGACATGAAGCACTGGTCTTTCAGAGTTGTCAGTGATGGAGGGAAGCCTAAGG 523468 Query 451206 TTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265 | || || | |||||||| ||||| || | ||| ||||| ||||| || || |||| Sbjct 523467 TACAGGTTGAGTATAAAGGAGAAACCAAGTCATTTTACCCTGAGGAAATCTCTTCCATGG 523408 Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAG 451325 | || || ||||| || | ||||| || | || | || || |||| | Sbjct 523407 TCCTGGTGAAGATGAAGGAGATTGCAGAGGCTTACCTGGGACATAAGGTGACAAATGCTG 523348 Query 451326 TAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGAC 451385 | ||||| ||||| || ||||||||||| | || ||||||| |||||||| || ||| Sbjct 523347 TCATTACAGTTCCTGCCTATTTCAATGACTCCCAGAGGCAAGCGACTAAAGACGCTGGAG 523288 Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437 || ||||| | ||||| || |||| || || || || ||||| || || Sbjct 523287 TAATCGCTGGGCTGAATGTCCTGAGAATCATCAACGAGCCCACAGCTGCAGC 523236 >seq5900 Length=2632787 Score = 95.1 bits (104), Expect = 5e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977 |||| |||||||| || ||||||| || ||||||||||||| |||| ||||||| || | Sbjct 337882 TTGGTATTGATCTCGGGACCACCTACTCCTGTGTAGGTGTTTTCCAACATGGAAAAGTTG 337941 Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCC 451014 |||| || || |||||||||||| || || ||||| Sbjct 337942 AAATCATCGCTAATGACCAAGGAAACCGGACCACTCC 337978 >seq6022 Length=3101233 Score = 91.5 bits (100), Expect = 6e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977 |||| |||||||| || ||||||| || ||||||||||||| |||| ||||||| || | Sbjct 2865597 TTGGTATTGATCTCGGGACCACCTACTCCTGTGTAGGTGTTTTCCAACATGGAAAAGTTG 2865656 Query 450978 AAATTATAGCAAATGACCAAGGA 451000 |||| || || |||||||||||| Sbjct 2865657 AAATCATTGCTAATGACCAAGGA 2865679 >seq46 Length=2207375 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || |||||||| || || || || || || ||||| | Sbjct 2030554 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 2030613 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | ||| ||||| ||||| |||||||| ||||||||||| || Sbjct 2030614 GACACCATTGAGAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGACCAG 2030673 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || ||||||||| | || || | || || || Sbjct 2030674 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 2030733 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || || ||| Sbjct 2030734 ATCCAGAAGGAGTCCACTCTCCAC 2030757 Score = 87.8 bits (96), Expect = 7e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||||| || || || || || || ||||| | Sbjct 2031671 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 2031730 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | ||| ||||| ||||| |||||||| ||||||||||| || Sbjct 2031731 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGACCAG 2031790 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || ||||||||| | || || | || || || Sbjct 2031791 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 2031850 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 2031851 ATCCAGAAGGA 2031861 Score = 84.2 bits (92), Expect = 9e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||||||| || || || || || || ||||| | Sbjct 2030782 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 2030841 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || || || ||||||||||| ||||||||||| || Sbjct 2030842 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCAG 2030901 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || ||||||||| | || || | || || || Sbjct 2030902 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 2030961 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || ||| | || | | |||||||| Sbjct 2030962 ATCCAGAAGGAGTCCACTCTCCACCTGGTGCTCCGTCTGAGAGG 2031005 Score = 84.2 bits (92), Expect = 9e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||||||| || || || ||| | || ||||| | | Sbjct 2031443 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACTTTGGAAGTTGAGCCCAGT 2031502 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || || || || |||||||| |||||||||||||| Sbjct 2031503 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 2031562 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || || |||||| | || || | || || || Sbjct 2031563 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGACGCACCCTGTCTGACTACAAC 2031622 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || ||| | || | | |||||||| Sbjct 2031623 ATCCAGAAGGAGTCCACTCTCCACCTGGTGCTCCGTCTGAGAGG 2031666 >seq3406 Length=495462 Score = 84.2 bits (92), Expect = 9e-11 Identities = 75/93 (81%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 ||||| || || || ||||| ||||||||||| ||||| ||||| ||||||| || || Sbjct 17395 GCAACCAAGGACGCCGGACAGATTGCTGGTTTGAATGTGCTTCGTGTTATTAACGAGCCG 17454 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459 || || |||||| |||| || ||||| |||||| Sbjct 17455 ACGGCTGCTGCTTTAGCCTACGGACT-GGAAAA 17486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1973549455105656