Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq19301 118 1e-21
seq3398 118 1e-21
seq77944 116 4e-21
seq6006 87.8 2e-12
seq16819 82.4 9e-11
>seq19301
Length=1192634
Score = 118 bits (130), Expect = 1e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551
|||||||||| |||||||||| ||| ||||| |||||||| | || || || ||
Sbjct 383136 CTCATCCTTACTGGTGTACTCTACAATCTCTGTGCACAAGTTACTGCATTTGATGGTGCC 383195
Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611
|| |||| ||||| ||||| |||||| ||||||||||||||||||||||| || ||
Sbjct 383196 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGTAGGGTGTGCC 383255
Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646
||||| ||||| |||| | || || | |||||
Sbjct 383256 GGTCTCTGTCTGAGACTCAATGATGGCATACCACA 383290
>seq3398
Length=854497
Score = 118 bits (130), Expect = 1e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551
|||||||||| |||||||||| ||||||||| |||||||| | ||||| || ||
Sbjct 23557 CTCATCCTTACTGGTGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCC 23498
Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611
|| |||| ||||| || || |||||| ||||||||||| ||||||||||| || ||
Sbjct 23497 CAGGTTCTGCTGGTTGCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGCC 23438
Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646
||||| ||||| |||| | || || | |||||
Sbjct 23437 GGTCTCTGTCTGAGACTCAATGATGGCATACCACA 23403
>seq77944
Length=846
Score = 116 bits (128), Expect = 4e-21
Identities = 108/137 (79%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551
|||||||||| |||||||||| ||||||||| |||||||| | ||||| || ||
Sbjct 148 CTCATCCTTACTGGTGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCC 89
Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611
|| |||| ||||| || || |||||| ||||||||||| ||||||||||| || ||
Sbjct 88 CAGGTTCTGCTGGTTGCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGCC 29
Query 106612 CGTCTCCGTCTGTGACT 106628
||||| ||||| ||||
Sbjct 28 GGTCTCTGTCTGAGACT 12
>seq6006
Length=139621
Score = 87.8 bits (96), Expect = 2e-12
Identities = 94/122 (77%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352
||||||||| | ||||||||||| |||||| || || |||||||| || | |||||
Sbjct 86163 CCTCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCT 86222
Query 117353 TCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411
| | ||| |||||| ||| || |||||||| |||||||| || |||||| |||||
Sbjct 86223 TTAGCCAGAAAATAGAAGCA-AAAGACCCGGAAAAGAAGATTCCTTCCACAGCAGCAAAA 86281
Query 117412 GC 117413
||
Sbjct 86282 GC 86283
>seq16819
Length=1945512
Score = 82.4 bits (90), Expect = 9e-11
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352
||||||||| | ||||||||||| |||||| || || |||||||| || | |||||
Sbjct 739164 CCTCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCT 739105
Query 117353 TCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411
| | ||| |||||| ||| || ||||| || |||||||| || |||||| |||||
Sbjct 739104 TTAGCCAGAAAATAGAAGCA-AAAGACCCAGAAAAGAAGATTCCTTCCACAGCAGCAAAA 739046
Query 117412 GC 117413
||
Sbjct 739045 GC 739044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589348915813680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |