Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq46 152 1e-31
seq1581 141 2e-28
seq20611 140 7e-28
seq13143 138 3e-27
>seq46
Length=2207375
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || |||||||| || || || ||||| |||| || || | ||||||||
Sbjct 2031879 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCC 2031820
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| |||||||| || || || ||||| |||||||||||||| ||||||||
Sbjct 2031819 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGG 2031760
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
||||| ||||| |||||||||||||| || || || ||||| | |||||
Sbjct 2031759 ATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTG 2031700
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| ||||| || || ||||| | |||||
Sbjct 2031699 CCAGTCAAGGTCTTCACGAAGATCTGCAT 2031671
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| |||| || || | ||||||||
Sbjct 2030990 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCC 2030931
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| |||||||||||||| || || ||
Sbjct 2030930 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGG 2030871
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||||||||||||||| || || || ||||| | |||||
Sbjct 2030870 ATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTG 2030811
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || ||||| | |||||
Sbjct 2030810 CCAGTCAGCGTCTTGACGAAGATCTGCAT 2030782
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| |||| || || | ||||||||
Sbjct 2030762 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCC 2030703
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| |||||||||||||| ||||||||
Sbjct 2030702 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGG 2030643
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
||||| || || |||||||||||||| || || || ||||| | |||||
Sbjct 2030642 ATTTTAGCTTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTG 2030583
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || || || | |||||
Sbjct 2030582 CCAGTCAGCGTCTTCACAAAGATCTGCAT 2030554
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || || ||||||||||| || || ||||| |||| ||||| | ||||||||
Sbjct 2031218 ACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCC 2031159
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
| ||| || || |||||||| | || || ||||| |||||||||||||| || || ||
Sbjct 2031158 AACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGG 2031099
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||||||||||||||| || || || ||||| | |||||
Sbjct 2031098 ATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTG 2031039
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| ||||| || || ||||| | |||||
Sbjct 2031038 CCAGTCAAGGTCTTCACGAAGATCTGCAT 2031010
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| |||| || || | ||||||||
Sbjct 2031423 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCC 2031364
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| || ||||| || || || ||||| |||||||||||||| ||||| ||
Sbjct 2031363 AGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGG 2031304
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||||||||| |||||||| || || || ||||| | || ||
Sbjct 2031303 ATCTTGGCCTTGACGTTCTCTATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTTTTA 2031244
Query 195112 CCTGTCAAAGTTTTTAC 195128
|| ||||| || || ||
Sbjct 2031243 CCAGTCAAGGTCTTCAC 2031227
Score = 136 bits (150), Expect = 9e-27
Identities = 158/212 (75%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| || | || || | ||||| ||
Sbjct 2031651 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCCTCC 2031592
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || || || |||||||||||||| ||||| ||
Sbjct 2031591 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGG 2031532
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||||||||||||||||||||| ||| || ||||| | || | |||
Sbjct 2031531 ATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACTTCCAAAGTGATGGTC 2031475
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || |||| || || ||||| | |||||
Sbjct 2031474 TTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2031443
>seq1581
Length=2594311
Score = 141 bits (156), Expect = 2e-28
Identities = 169/228 (74%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | || || || || | ||||||||||| || || ||||| || | || ||
Sbjct 1373177 CTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTG 1373236
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| ||||| || || |||||||| || | || ||||| || |||||||||
Sbjct 1373237 CGACCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCT 1373296
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCA 195096
|||||||| || || ||| ||||||||||||||||||||| ||| || || |||
Sbjct 1373297 TCTTTGTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTC---GCTTGGCTCGACCTCA 1373353
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTAT 195144
||||| | ||||| || || | ||||| || || | ||||| |||
Sbjct 1373354 AGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCATCTAT 1373401
>seq20611
Length=922441
Score = 140 bits (154), Expect = 7e-28
Identities = 166/224 (74%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | ||| || || || | |||||||||||||| || ||||| || | | ||
Sbjct 520323 CTGAGACGCAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTG 520382
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| ||||| || || || ||||| | | || ||||| || ||||| |||
Sbjct 520383 CGACCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCT 520442
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCA 195096
||||| || || || || ||||||||||||||||||||| |||| || || |||
Sbjct 520443 TCTTTATCCTGGATCTTAGCCTTGACGTTCTCAATGGTGTC---ACTTGGCTCAACCTCA 520499
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| |||||||| || || ||||| | |||||
Sbjct 520500 AGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 520543
Score = 129 bits (142), Expect = 1e-24
Identities = 166/228 (73%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | || ||||| || | |||||||||||| || || ||||| || | | ||
Sbjct 520551 CTGAGACGCAGCACAAGATGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGACAATGTG 520610
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| ||||| || || || ||||| | | || ||||| || |||||||||
Sbjct 520611 CGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCT 520670
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCA 195096
|||||||| || || || ||||||||||||||| ||||| ||| || || |||
Sbjct 520671 TCTTTGTCCTGGATCTTAGCCTTGACGTTCTCAATTGTGTC---GCTTGGCTCAACCTCA 520727
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTAT 195144
||||| | ||||| || || | ||||| || || | ||||| |||
Sbjct 520728 AGGGTGATGGTCTTACCAGTGAGGGTTTTGACAAAGATCTGCATCTAT 520775
>seq13143
Length=1991197
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || |||||||| || || || ||||| |||| || || | ||||||||
Sbjct 1626596 ACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCTTCA 1626537
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| |||||||||||||| ||||| ||
Sbjct 1626536 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGG 1626477
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||||||||||||||| || || || ||||| | |||||
Sbjct 1626476 ATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTG 1626417
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| ||||| || || | |||||
Sbjct 1626416 CCAGTCAGGGTTTTCACAAAGATCTGCAT 1626388
Score = 134 bits (148), Expect = 3e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | || ||||| || || ||||| || || || || |||||||| | || ||
Sbjct 1624815 TCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGT 1624756
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| | |||||| || || ||||| || || || ||||| ||||| |||||
Sbjct 1624755 GCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCC 1624696
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| ||||| |||||||||||||||||||| || || || ||
Sbjct 1624695 TTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAG 1624636
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || |||| || || ||||| | |||||
Sbjct 1624635 GGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 1624594
Score = 122 bits (134), Expect = 2e-22
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | || ||||| || || ||||| || || || || |||||||| | || ||
Sbjct 1625606 TCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGT 1625547
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| | |||||| || || ||||| || || || ||||| ||||| |||||
Sbjct 1625546 GCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCC 1625487
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTG 195078
||| |||||||| ||||| ||||||||||||||||||
Sbjct 1625486 TTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCAATGGTG 1625447
Score = 105 bits (116), Expect = 1e-17
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | || ||||| || || ||||||||||| || || ||||| |||| |||||
Sbjct 1626381 TCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGT 1626322
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| | ||| || || |||||||| | || || ||||| |||||||||||
Sbjct 1626321 GCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCC 1626262
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGA 195064
||| || ||||| || || |||||
Sbjct 1626261 TTCCTTATCTTGGATCTTGGCCTTGA 1626236
Score = 104 bits (114), Expect = 5e-17
Identities = 110/144 (76%), Gaps = 6/144 (4%)
Strand=Plus/Minus
Query 195000 ACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTG 195059
||| || ||||| || || || ||||| |||||||||||||| |||||||| |||||
Sbjct 1625753 ACCAGCTAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGATTTTAGC 1625694
Query 195060 CTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||||||||||||||||| ||| || || |||||||| | ||||| || ||
Sbjct 1625693 TTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGT 1625637
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | |||||
Sbjct 1625636 CAGTGTCTTGACGAAGATCTGCAT 1625613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108263610406094
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