Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq11199 104 3e-17 seq11759 100 3e-16 seq16819 89.7 6e-13 >seq11199 Length=1679328 Score = 104 bits (114), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 |||||||| || || | |||||| || |||| | ||| ||||| | |||||||| || Sbjct 643752 TCATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCTCTTTTCTTC 643693 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| | || || ||||| |||||||| ||||| || ||||| ||||||||||||||| Sbjct 643692 AACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCCACTGCTGCAAATGCT 643633 Query 37320 AC 37321 || Sbjct 643632 AC 643631 >seq11759 Length=1730004 Score = 100 bits (110), Expect = 3e-16 Identities = 99/127 (78%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 37195 AACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCttt 37254 ||||| ||||||| || || | |||||| || |||| | ||| ||||| | || |||| Sbjct 147485 AACCT-CATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCGCTTT 147543 Query 37255 ttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAA 37314 | || | ||| | || || ||||| |||||||| ||||| || ||||| |||||||||| Sbjct 147544 TCTTCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCTACTGCTGCAA 147603 Query 37315 ATGCTAC 37321 ||||||| Sbjct 147604 ATGCTAC 147610 >seq16819 Length=1945512 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 |||||||| || || | |||||| || ||||| | ||| ||||| | ||||| || || Sbjct 739162 TCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCTTT 739103 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| || || | |||||||| ||||||||||| || ||||| || || ||||| || Sbjct 739102 AGCCAGAAAATAGAAGCAAAAGACCCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCC 739043 Query 37320 AC 37321 || Sbjct 739042 AC 739041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591682413899280