Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq13169 95.1 1e-14 >seq13169 Length=2235454 Score = 95.1 bits (104), Expect = 1e-14 Identities = 205/306 (67%), Gaps = 3/306 (1%) Strand=Plus/Minus Query 160086 TCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGC 160145 || || ||| ||| || || ||||| || |||||||| | ||||| ||||| | Sbjct 1215562 TCTACTTCTGGGTCAAACTTGTTTGCCAAAAGATGGTGT---TGCTGTACAATCCATTTT 1215506 Query 160146 ACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTAC 160205 | ||| || | || | || || || | ||| |||||| || |||| || ||||| Sbjct 1215505 AAGTCCCCAGCTCCATAGACACACACTGCCCGTCTGTGCATCCCAGTGCATGGTGGGTAG 1215446 Query 160206 AGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCC 160265 |||| || || | || ||||| | ||| ||||||||| | | ||| || || Sbjct 1215445 GGAGCCCCACTCTTTAGATCTCCTTCATGGTAGCTCCACTTCACCAGACGGGCAATTGCA 1215386 Query 160266 TGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATA 160325 | |||||| || | ||| ||| | | ||| | || ||||| ||||| Sbjct 1215385 TTCATGTCCGATTGCTGGTACTTGATGTTTGGAGGATTAGATCCTGGAACTGAAGGCATC 1215326 Query 160326 CGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATG 160385 ||||||| || ||||||| ||| || || || ||||||||||| || |||||||||| Sbjct 1215325 CGCTGTAATGTAGCCCACATGTGCTCATCTGGACTGTACGTGTCTTTCTCCCATTCCATG 1215266 Query 160386 AACTCT 160391 || ||| Sbjct 1215265 AAATCT 1215260 Score = 93.3 bits (102), Expect = 5e-14 Identities = 219/330 (66%), Gaps = 3/330 (1%) Strand=Plus/Minus Query 160062 TCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGCGAACAGATGG 160121 |||| ||||| || || | |||| || ||| ||| || || |||| || ||||| Sbjct 1182133 TCCATACATTTGATTGCTACATCGTCTACTTCTGGGTCAAACTTGTTTGTCAAAAGATGA 1182074 Query 160122 TGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTATG 160181 || | ||| | ||||| | || ||| || | || | || || || | ||| || Sbjct 1182073 TGT---TGCTGCACAATCCATTTCAAGTCCCCAGCTCCATAGACACACACTGCCCGTCTG 1182017 Query 160182 TGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGC 160241 |||| || |||| || ||||| || | || ||| || || ||||| | ||| | Sbjct 1182016 TGCATCCCAGTGCATGGTGGGTAGGGATCCCCATTCTTCAGTTCTCCTTCATGGTAGCTC 1181957 Query 160242 CACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGA 160301 |||||||| || | || || | | |||||| || | ||| ||| | | ||| Sbjct 1181956 CACTTCACCAAACGAGCAATTGAATTCATGTCCGATTGCTGGTACTTGATGTTTGGAGGA 1181897 Query 160302 ACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTG 160361 || || || || ||||| ||||||| || ||||||| ||| || || || ||| Sbjct 1181896 TTGGATCCTGGTACTGAAGGCATTCGCTGTAATGTAGCCCACATGTGCTCATCTGGACTG 1181837 Query 160362 TACGTGTCCTTAGACCATTCCATGAACTCT 160391 |||||||| || |||||||||||| ||| Sbjct 1181836 TACGTGTCTTTCTCCCATTCCATGAAATCT 1181807 Score = 86.0 bits (94), Expect = 7e-12 Identities = 203/306 (66%), Gaps = 3/306 (1%) Strand=Plus/Minus Query 160086 TCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGC 160145 || || ||| ||| || || || || || |||||||| | ||||| ||||| | Sbjct 1211811 TCTACTTCTGGGTCAAACTTGTTGGCCAAAAGATGGTGT---TGCTGTACAATCCATTAT 1211755 Query 160146 ACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTAC 160205 | ||| || | || | || || || | ||| ||||| || |||| |||||||| Sbjct 1211754 AAGTCCCCAGCTCCATAGACACACACTGCCCGTCTGTGCGTCCCAGTGCATGGCGGGTAG 1211695 Query 160206 AGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCC 160265 ||||||| || | || ||||| | ||| ||||||||| | | || || | Sbjct 1211694 GGAGCTCCACTCTTTAGATCTCCTTCATGGTAGCTCCACTTCACCAGACGAGCAATTGAA 1211635 Query 160266 TGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATA 160325 | |||||| || || || ||| | | ||| | || ||||| ||||| Sbjct 1211634 TTCATGTCCGATTGTTCATACTTGATGTTTGGAGGATTAGATCCTGGAACTGAAGGCATC 1211575 Query 160326 CGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATG 160385 ||||||| || ||||||| ||| || || || ||||||||||| || |||||||||| Sbjct 1211574 CGCTGTAATGTAGCCCACATGTGCTCATCTGGACTGTACGTGTCTTTCTCCCATTCCATG 1211515 Query 160386 AACTCT 160391 || ||| Sbjct 1211514 AAATCT 1211509 Score = 84.2 bits (92), Expect = 3e-11 Identities = 203/306 (66%), Gaps = 6/306 (2%) Strand=Plus/Minus Query 160086 TCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGC 160145 || || ||| ||| || || ||||| || |||||||| | ||||| ||||| | Sbjct 1238669 TCTACTTCTGGGTCAAACTTGTTTGCCAAAAGATGGTGT---TGCTGTACAATCCATTTT 1238613 Query 160146 ACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTAC 160205 | ||| || | || | || || || | ||| |||||| || |||| || || || Sbjct 1238612 AAGTCCCCAGCTCCATAGACACACACTGCCCGTCTGTGCATCCCAGTGCATGGTGGCTAG 1238553 Query 160206 AGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCC 160265 |||| || ||| || || ||| |||| ||||||||| || | || || || Sbjct 1238552 GGAGCCCCATTCTTCAGTTC---TTCAAAGTAGCTCCACTTCACCAAACGAGCAATTGCA 1238496 Query 160266 TGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATA 160325 | || ||| || | ||| ||| | | ||| | || ||||| ||||| Sbjct 1238495 TTCACGTCCGATTGCTGGTACTTGATGTTTGGAGGATTAGATCCTGGAACTGAAGGCATC 1238436 Query 160326 CGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATG 160385 ||||||| || ||||||| ||| || || || ||||||||||| || |||||||||| Sbjct 1238435 CGCTGTAATGTAGCCCACATGTGCTCATCTGGACTGTACGTGTCTTTCTCCCATTCCATG 1238376 Query 160386 AACTCT 160391 || ||| Sbjct 1238375 AAATCT 1238370 Score = 82.4 bits (90), Expect = 9e-11 Identities = 202/306 (66%), Gaps = 3/306 (1%) Strand=Plus/Minus Query 160086 TCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGC 160145 || || ||| ||| || || || || || |||||||| | ||||| ||||| | Sbjct 1223187 TCTACTTCTGGGTCAAACTTGTTGGCCAAAAGATGGTGT---TGCTGTACAATCCATTTT 1223131 Query 160146 ACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTAC 160205 | ||| || | || | || || | | || |||||| || |||| || ||||| Sbjct 1223130 AAGTCCCCAGCTCCATAGACACACATTGCCTGTCTGTGCATCCCAGTGCATGGTGGGTAG 1223071 Query 160206 AGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCC 160265 |||| || || | || ||||| | ||| ||||||||| | | ||| || || Sbjct 1223070 GGAGCCCCACTCTTTAGATCTCCTTCATGGTAGCTCCACTTCACCAGACGGGCAATTGCA 1223011 Query 160266 TGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATA 160325 | |||||| || | ||| ||| | | ||| | || ||||| ||||| Sbjct 1223010 TTCATGTCCGATTGCTGGTACTTGATGTTTGGAGGATTAGATCCTGGAACTGAAGGCATC 1222951 Query 160326 CGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATG 160385 ||||||| || ||||||| ||| || || || ||||||||||| || |||||||||| Sbjct 1222950 CGCTGTAATGTAGCCCACATGTGCTCATCTGGACTGTACGTGTCTTTCTCCCATTCCATG 1222891 Query 160386 AACTCT 160391 || ||| Sbjct 1222890 AAATCT 1222885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576600983806320