Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq13169 95.1 1e-14
>seq13169
Length=2235454
Score = 95.1 bits (104), Expect = 1e-14
Identities = 205/306 (67%), Gaps = 3/306 (1%)
Strand=Plus/Minus
Query 160086 TCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGC 160145
|| || ||| ||| || || ||||| || |||||||| | ||||| ||||| |
Sbjct 1215562 TCTACTTCTGGGTCAAACTTGTTTGCCAAAAGATGGTGT---TGCTGTACAATCCATTTT 1215506
Query 160146 ACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTAC 160205
| ||| || | || | || || || | ||| |||||| || |||| || |||||
Sbjct 1215505 AAGTCCCCAGCTCCATAGACACACACTGCCCGTCTGTGCATCCCAGTGCATGGTGGGTAG 1215446
Query 160206 AGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCC 160265
|||| || || | || ||||| | ||| ||||||||| | | ||| || ||
Sbjct 1215445 GGAGCCCCACTCTTTAGATCTCCTTCATGGTAGCTCCACTTCACCAGACGGGCAATTGCA 1215386
Query 160266 TGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATA 160325
| |||||| || | ||| ||| | | ||| | || ||||| |||||
Sbjct 1215385 TTCATGTCCGATTGCTGGTACTTGATGTTTGGAGGATTAGATCCTGGAACTGAAGGCATC 1215326
Query 160326 CGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATG 160385
||||||| || ||||||| ||| || || || ||||||||||| || ||||||||||
Sbjct 1215325 CGCTGTAATGTAGCCCACATGTGCTCATCTGGACTGTACGTGTCTTTCTCCCATTCCATG 1215266
Query 160386 AACTCT 160391
|| |||
Sbjct 1215265 AAATCT 1215260
Score = 93.3 bits (102), Expect = 5e-14
Identities = 219/330 (66%), Gaps = 3/330 (1%)
Strand=Plus/Minus
Query 160062 TCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGCGAACAGATGG 160121
|||| ||||| || || | |||| || ||| ||| || || |||| || |||||
Sbjct 1182133 TCCATACATTTGATTGCTACATCGTCTACTTCTGGGTCAAACTTGTTTGTCAAAAGATGA 1182074
Query 160122 TGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTATG 160181
|| | ||| | ||||| | || ||| || | || | || || || | ||| ||
Sbjct 1182073 TGT---TGCTGCACAATCCATTTCAAGTCCCCAGCTCCATAGACACACACTGCCCGTCTG 1182017
Query 160182 TGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGC 160241
|||| || |||| || ||||| || | || ||| || || ||||| | ||| |
Sbjct 1182016 TGCATCCCAGTGCATGGTGGGTAGGGATCCCCATTCTTCAGTTCTCCTTCATGGTAGCTC 1181957
Query 160242 CACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGA 160301
|||||||| || | || || | | |||||| || | ||| ||| | | |||
Sbjct 1181956 CACTTCACCAAACGAGCAATTGAATTCATGTCCGATTGCTGGTACTTGATGTTTGGAGGA 1181897
Query 160302 ACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTG 160361
|| || || || ||||| ||||||| || ||||||| ||| || || || |||
Sbjct 1181896 TTGGATCCTGGTACTGAAGGCATTCGCTGTAATGTAGCCCACATGTGCTCATCTGGACTG 1181837
Query 160362 TACGTGTCCTTAGACCATTCCATGAACTCT 160391
|||||||| || |||||||||||| |||
Sbjct 1181836 TACGTGTCTTTCTCCCATTCCATGAAATCT 1181807
Score = 86.0 bits (94), Expect = 7e-12
Identities = 203/306 (66%), Gaps = 3/306 (1%)
Strand=Plus/Minus
Query 160086 TCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGC 160145
|| || ||| ||| || || || || || |||||||| | ||||| ||||| |
Sbjct 1211811 TCTACTTCTGGGTCAAACTTGTTGGCCAAAAGATGGTGT---TGCTGTACAATCCATTAT 1211755
Query 160146 ACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTAC 160205
| ||| || | || | || || || | ||| ||||| || |||| ||||||||
Sbjct 1211754 AAGTCCCCAGCTCCATAGACACACACTGCCCGTCTGTGCGTCCCAGTGCATGGCGGGTAG 1211695
Query 160206 AGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCC 160265
||||||| || | || ||||| | ||| ||||||||| | | || || |
Sbjct 1211694 GGAGCTCCACTCTTTAGATCTCCTTCATGGTAGCTCCACTTCACCAGACGAGCAATTGAA 1211635
Query 160266 TGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATA 160325
| |||||| || || || ||| | | ||| | || ||||| |||||
Sbjct 1211634 TTCATGTCCGATTGTTCATACTTGATGTTTGGAGGATTAGATCCTGGAACTGAAGGCATC 1211575
Query 160326 CGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATG 160385
||||||| || ||||||| ||| || || || ||||||||||| || ||||||||||
Sbjct 1211574 CGCTGTAATGTAGCCCACATGTGCTCATCTGGACTGTACGTGTCTTTCTCCCATTCCATG 1211515
Query 160386 AACTCT 160391
|| |||
Sbjct 1211514 AAATCT 1211509
Score = 84.2 bits (92), Expect = 3e-11
Identities = 203/306 (66%), Gaps = 6/306 (2%)
Strand=Plus/Minus
Query 160086 TCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGC 160145
|| || ||| ||| || || ||||| || |||||||| | ||||| ||||| |
Sbjct 1238669 TCTACTTCTGGGTCAAACTTGTTTGCCAAAAGATGGTGT---TGCTGTACAATCCATTTT 1238613
Query 160146 ACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTAC 160205
| ||| || | || | || || || | ||| |||||| || |||| || || ||
Sbjct 1238612 AAGTCCCCAGCTCCATAGACACACACTGCCCGTCTGTGCATCCCAGTGCATGGTGGCTAG 1238553
Query 160206 AGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCC 160265
|||| || ||| || || ||| |||| ||||||||| || | || || ||
Sbjct 1238552 GGAGCCCCATTCTTCAGTTC---TTCAAAGTAGCTCCACTTCACCAAACGAGCAATTGCA 1238496
Query 160266 TGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATA 160325
| || ||| || | ||| ||| | | ||| | || ||||| |||||
Sbjct 1238495 TTCACGTCCGATTGCTGGTACTTGATGTTTGGAGGATTAGATCCTGGAACTGAAGGCATC 1238436
Query 160326 CGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATG 160385
||||||| || ||||||| ||| || || || ||||||||||| || ||||||||||
Sbjct 1238435 CGCTGTAATGTAGCCCACATGTGCTCATCTGGACTGTACGTGTCTTTCTCCCATTCCATG 1238376
Query 160386 AACTCT 160391
|| |||
Sbjct 1238375 AAATCT 1238370
Score = 82.4 bits (90), Expect = 9e-11
Identities = 202/306 (66%), Gaps = 3/306 (1%)
Strand=Plus/Minus
Query 160086 TCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGC 160145
|| || ||| ||| || || || || || |||||||| | ||||| ||||| |
Sbjct 1223187 TCTACTTCTGGGTCAAACTTGTTGGCCAAAAGATGGTGT---TGCTGTACAATCCATTTT 1223131
Query 160146 ACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTAC 160205
| ||| || | || | || || | | || |||||| || |||| || |||||
Sbjct 1223130 AAGTCCCCAGCTCCATAGACACACATTGCCTGTCTGTGCATCCCAGTGCATGGTGGGTAG 1223071
Query 160206 AGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCC 160265
|||| || || | || ||||| | ||| ||||||||| | | ||| || ||
Sbjct 1223070 GGAGCCCCACTCTTTAGATCTCCTTCATGGTAGCTCCACTTCACCAGACGGGCAATTGCA 1223011
Query 160266 TGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATA 160325
| |||||| || | ||| ||| | | ||| | || ||||| |||||
Sbjct 1223010 TTCATGTCCGATTGCTGGTACTTGATGTTTGGAGGATTAGATCCTGGAACTGAAGGCATC 1222951
Query 160326 CGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATG 160385
||||||| || ||||||| ||| || || || ||||||||||| || ||||||||||
Sbjct 1222950 CGCTGTAATGTAGCCCACATGTGCTCATCTGGACTGTACGTGTCTTTCTCCCATTCCATG 1222891
Query 160386 AACTCT 160391
|| |||
Sbjct 1222890 AAATCT 1222885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 576600983806320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |