Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq77944 95.1 1e-14 seq19301 95.1 1e-14 seq3398 95.1 1e-14 seq6006 87.8 2e-12 seq16819 82.4 9e-11 >seq77944 Length=846 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || ||||| || ||||||||||||||||| || ||| || || Sbjct 14 TCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTGCAACCGCAAAAGC 73 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| |||| || || || || || | ||||| |||||| |||||||| Sbjct 74 AACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGAAATTGTAGAGTAC 133 Query 76016 ACAGATAAGGATGAG 76030 || |||||||||| Sbjct 134 ACCAGTAAGGATGAG 148 >seq19301 Length=1192634 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || ||||| || ||||| ||||||||||| || ||| ||||| Sbjct 383270 TCTCAGACAGAGACCGGCACACCCTACATGCTCTACAAGGATGCCTGCAACCGCAAGAGC 383211 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| |||| || ||||| || || | ||||| || ||| |||||||| Sbjct 383210 AACCAGCAGAACCTGGGCACCATCAAATGCAGTAACTTGTGCACAGAGATTGTAGAGTAC 383151 Query 76016 ACAGATAAGGATGAG 76030 || |||||||||| Sbjct 383150 ACCAGTAAGGATGAG 383136 >seq3398 Length=854497 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || ||||| || ||||||||||||||||| || ||| || || Sbjct 23423 TCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTGCAACCGCAAAAGC 23482 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| |||| || || || || || | ||||| |||||| |||||||| Sbjct 23483 AACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGAAATTGTAGAGTAC 23542 Query 76016 ACAGATAAGGATGAG 76030 || |||||||||| Sbjct 23543 ACCAGTAAGGATGAG 23557 >seq6006 Length=139621 Score = 87.8 bits (96), Expect = 2e-12 Identities = 94/122 (77%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTT 65147 || ||||| |||||| || |||||||| |||||||| || ||| |||||| ||| | Sbjct 86283 GCTTTTGCTGCTGTGGAAGGAATCTTCTTTTCCGGGTCTTT-TGCTTCTATTTTCTGGCT 86225 Query 65148 GAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGA 65207 |||||| | || |||||||| || || |||||| ||||||||||| | ||||||| Sbjct 86224 AAAGAAGAGAGGACTCATGCCTGGACTCACCTTCTCCAATGAACTTATCAGCAGAGATGA 86165 Query 65208 GG 65209 || Sbjct 86164 GG 86163 >seq16819 Length=1945512 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/122 (76%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTT 65147 || ||||| |||||| || |||||||| || ||||| || ||| |||||| ||| | Sbjct 739044 GCTTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGGTCTTT-TGCTTCTATTTTCTGGCT 739102 Query 65148 GAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGA 65207 |||||| | || |||||||| || || |||||| ||||||||||| | ||||||| Sbjct 739103 AAAGAAGAGAGGACTCATGCCTGGACTCACCTTCTCCAATGAACTTATCAGCAGAGATGA 739162 Query 65208 GG 65209 || Sbjct 739163 GG 739164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595930659044160