Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq20611 93.3 8e-14 seq1581 89.7 9e-13 seq13143 87.8 3e-12 >seq20611 Length=922441 Score = 93.3 bits (102), Expect = 8e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 ||||||||||| || | |||||| || || ||||| || || || | | ||| || Sbjct 520335 ACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACCATCTTCC 520394 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||||| |||||||| || || ||||| || ||||| || || ||||||||||| || Sbjct 520395 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCTTCTTTATCCTGG 520454 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || || | || | || ||| || || | |||||| || || || || || || Sbjct 520455 ATCTTAGCCTTGACGTTCTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGTCTTG 520514 Query 193332 CCTGTTAGCGtttttacaaatatttgcat 193360 ||||| | || || || || || ||||| Sbjct 520515 CCTGTCAAGGTCTTGACGAAGATCTGCAT 520543 >seq1581 Length=2594311 Score = 89.7 bits (98), Expect = 9e-13 Identities = 187/276 (68%), Gaps = 2/276 (1%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||| || || | || || ||||||||||| || | |||||| || || ||||| || Sbjct 1373170 ACCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGA 1373229 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | || | | ||| || | ||||| || || || || | ||||| || ||||| || Sbjct 1373230 CAGTGTGCGACCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGG 1373289 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || |||||||| || || || || | || | || ||| || ||| | ||| || Sbjct 1373290 AATGCCTTCTTTGTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGAC 1373349 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattttattagtaaa 193372 || || || || || || || || || ||||| ||||| || |||| | ||| | ||| Sbjct 1373350 CTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCA-TCTATAAACAAA 1373408 Query 193373 ataattattttaaataatatatac-tttatatttta 193407 | ||| | || || | |||||| | ||||| ||| Sbjct 1373409 AAAATATATATACATTAAATATACATATATATATTA 1373444 >seq13143 Length=1991197 Score = 87.8 bits (96), Expect = 3e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| || || || ||||| | || | || || || || || || Sbjct 1624823 ATACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCA 1624764 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | ||| | ||| || || || || || ||||| || | | ||| || |||||| Sbjct 1624763 GACAGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGA 1624704 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| ||||| | ||| | || ||| || ||| | |||| Sbjct 1624703 GGGATGCCTTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCA 1624644 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363 || || || || || || || || || ||||| || || || || ||||| || Sbjct 1624643 ACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATCTT 1624591 Score = 87.8 bits (96), Expect = 3e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| || || || ||||| | || | |||||| || || |||||| Sbjct 1626389 ATACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCG 1626330 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || || ||||| ||||| || || || | ||| || |||||| Sbjct 1626329 GACAGAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGA 1626270 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGG 193278 || || ||||| |||||||| || |||| Sbjct 1626269 GGAATGCCTTCCTTATCTTGGATCTTGG 1626242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898690847646240