Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq20611 93.3 8e-14
seq1581 89.7 9e-13
seq13143 87.8 3e-12
>seq20611
Length=922441
Score = 93.3 bits (102), Expect = 8e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
||||||||||| || | |||||| || || ||||| || || || | | ||| ||
Sbjct 520335 ACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACCATCTTCC 520394
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||||| |||||||| || || ||||| || ||||| || || ||||||||||| ||
Sbjct 520395 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCTTCTTTATCCTGG 520454
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| || | || | || ||| || || | |||||| || || || || || ||
Sbjct 520455 ATCTTAGCCTTGACGTTCTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGTCTTG 520514
Query 193332 CCTGTTAGCGtttttacaaatatttgcat 193360
||||| | || || || || || |||||
Sbjct 520515 CCTGTCAAGGTCTTGACGAAGATCTGCAT 520543
>seq1581
Length=2594311
Score = 89.7 bits (98), Expect = 9e-13
Identities = 187/276 (68%), Gaps = 2/276 (1%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
||| || || | || || ||||||||||| || | |||||| || || ||||| ||
Sbjct 1373170 ACCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGA 1373229
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
| || | | ||| || | ||||| || || || || | ||||| || ||||| ||
Sbjct 1373230 CAGTGTGCGACCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGG 1373289
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| |||||||| || || || || | || | || ||| || ||| | ||| ||
Sbjct 1373290 AATGCCTTCTTTGTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGAC 1373349
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattttattagtaaa 193372
|| || || || || || || || || ||||| ||||| || |||| | ||| | |||
Sbjct 1373350 CTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCA-TCTATAAACAAA 1373408
Query 193373 ataattattttaaataatatatac-tttatatttta 193407
| ||| | || || | |||||| | ||||| |||
Sbjct 1373409 AAAATATATATACATTAAATATACATATATATATTA 1373444
>seq13143
Length=1991197
Score = 87.8 bits (96), Expect = 3e-12
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||||| || || || ||||| | || | || || || || || ||
Sbjct 1624823 ATACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCA 1624764
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | ||| | ||| || || || || || ||||| || | | ||| || ||||||
Sbjct 1624763 GACAGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGA 1624704
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||| | ||| | || ||| || ||| | ||||
Sbjct 1624703 GGGATGCCTTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCA 1624644
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363
|| || || || || || || || || ||||| || || || || ||||| ||
Sbjct 1624643 ACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATCTT 1624591
Score = 87.8 bits (96), Expect = 3e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||||| || || || ||||| | || | |||||| || || ||||||
Sbjct 1626389 ATACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCG 1626330
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || || ||||| ||||| || || || | ||| || ||||||
Sbjct 1626329 GACAGAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGA 1626270
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGG 193278
|| || ||||| |||||||| || ||||
Sbjct 1626269 GGAATGCCTTCCTTATCTTGGATCTTGG 1626242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 898690847646240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |