Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq20611 100 6e-16
seq13143 100 6e-16
>seq20611
Length=922441
Score = 100 bits (110), Expect = 6e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||| || || ||||| || || | ||| || || | |||||| ||| || || |||||
Sbjct 520316 ACCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGA 520375
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||||| || |||| |||| ||||| || |||||||| || ||||| || ||||| ||
Sbjct 520376 CAATGTGCGACCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 520435
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||||||||| || || ||| || || || || | || | || ||
Sbjct 520436 AATACCTTCTTTATCCTGGATCTTAGCCTTGACGTTCTCAATGGTGTCACTTGGCTCAAC 520495
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || ||||| || || || || || || | || ||||||||
Sbjct 520496 CTCAAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 520543
>seq13143
Length=1991197
Score = 100 bits (110), Expect = 6e-16
Identities = 171/246 (70%), Gaps = 3/246 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| | || | ||| | || | || || ||| || ||||||
Sbjct 1624823 ATACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCA 1624764
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || ||| |||| ||||| || || ||||||||||| | | ||| || |||||
Sbjct 1624763 GACAGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGA 1624704
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| |||||| ||| || || || | || | ||
Sbjct 1624703 GGGATGCCTTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCA 1624644
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT-TTTA--TTA 192543
|| || || || ||||| || ||||| | || || | || |||||||| |||| ||
Sbjct 1624643 ACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATCTTTACGCTA 1624584
Query 192544 GAAAAA 192549
||||||
Sbjct 1624583 GAAAAA 1624578
Score = 91.5 bits (100), Expect = 3e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| | || | ||| | || | || || ||| || ||||||
Sbjct 1625614 ATACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCA 1625555
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || ||| |||| ||||| || || ||||||||||| | | ||| || |||||
Sbjct 1625554 GACAGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGA 1625495
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 192464
|| || ||||| || ||||| |||||| ||| || ||
Sbjct 1625494 GGGATGCCTTCCTTGTCTTGGATTTTAGCTTTGACGTT 1625457
Score = 87.8 bits (96), Expect = 4e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| | || | ||| | || | |||||| ||| || || ||
Sbjct 1626389 ATACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCG 1626330
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || ||| |||| ||||| ||||| || || ||||| || | ||| || |||||
Sbjct 1626329 GACAGAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGA 1626270
Query 192427 GGTATTCCTTCTTTATCTTGTATTTT 192452
|| || ||||| |||||||| || ||
Sbjct 1626269 GGAATGCCTTCCTTATCTTGGATCTT 1626244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 983399237240700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |