Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq3400 111 1e-19
seq1581 86.0 5e-12
seq20611 82.4 6e-11
>seq3400
Length=902154
Score = 111 bits (122), Expect = 1e-19
Identities = 127/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377
||||| || || |||||||| || ||||||| |||||||||||| ||||| ||||| |||
Sbjct 242200 TCAGTTTCAGGATTGTCACACTCAGGACACAGCACAAACTTGCGAATGAATCCATCTAGC 242259
Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437
| ||| || | || | || || || || ||||||||| | || || || ||| |
Sbjct 242260 ATGTCTTGCAGTTTGTTTGCTTCATGAGATCCATTGACGATGTAGCGGTCATTCTTGCTA 242319
Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAA 34488
|||| ||| ||||| || |||| ||| || || ||| | || || || |||
Sbjct 242320 TCGAACTGGGTTTGGGCTCCCAACTCACAACCAAAGAATTTGGTGGGATAA 242370
>seq1581
Length=2594311
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || ||||||||||| | || ||||| ||||| ||| | || ||||| |
Sbjct 1373397 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCAAGC 1373338
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | || || ||||| |||||||||||| | ||| || ||
Sbjct 1373337 GACACCATTGAGAACGTCAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 1373278
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || || | || || ||||||||||| |||| | ||| || | || ||||||
Sbjct 1373277 CAGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATGGTCGCACACTGTCTGACTACAAC 1373218
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482
|| || ||||| || || ||||| |||||
Sbjct 1373217 ATCCAGAAAGAGTCCACCTTGCATCTGGTG 1373188
>seq20611
Length=922441
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || ||||||||||| | || || || ||||| ||| | || ||||| |
Sbjct 520771 ATGCAGATCTTTGTCAAAACCCTCACTGGTAAGACCATCACCCTTGAGGTTGAGCCAAGC 520712
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | || || ||||| |||||||||||| | ||| || ||
Sbjct 520711 GACACAATTGAGAACGTCAAGGCTAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 520652
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | || | ||| || ||||||||||| |||| | | ||| || | || ||||||
Sbjct 520651 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACATTGTCTGACTACAAC 520592
Query 110453 ATTCAAAAAGAATCTACGTTGCA 110475
|| || ||||| || || |||||
Sbjct 520591 ATCCAGAAAGAGTCCACTTTGCA 520569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412410490417226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |