Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1581 93.3 3e-14 seq20611 91.5 1e-13 >seq1581 Length=2594311 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/221 (70%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 107549 GTTTAAA-ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGG 107607 ||||| | ||||| || ||||||||||| | || ||||| ||||| ||| | || | Sbjct 1373405 GTTTATAGATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCG 1373346 Query 107608 AGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCG 107667 || | |||| || | | | || || |||||| || ||||||||| | ||| Sbjct 1373345 AGCCAAGCGACACCATTGAGAACGTCAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCC 1373286 Query 107668 TGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGG 107727 || |||||||| || || | || || ||||||||||| || | ||| || | | Sbjct 1373285 CTGACCAGCAGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATGGTCGCACACTGTCTG 1373226 Query 107728 ACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||||||||| || || ||||| || ||||| ||||| || Sbjct 1373225 ACTACAACATCCAGAAAGAGTCCACCTTGCATCTGGTGCTG 1373185 >seq20611 Length=922441 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || || |||||||| ||||| ||| | || ||| | | Sbjct 520543 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCAAGT 520484 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| ||||||||||| | ||| || ||| Sbjct 520483 GACACCATTGAGAACGTCAAGGCTAAGATCCAGGATAAAGAAGGTATTCCCCCTGACCAG 520424 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | || | ||| || ||||||||||| || | ||| || | ||||||||| Sbjct 520423 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGTCGCACATTGTCTGACTACAAC 520364 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 || ||||| ||||| || ||||| |||||||| Sbjct 520363 ATCCAAAAAGAGTCCACCTTGCATCTGGTGTTG 520331 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 107549 GTTTAAA-ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGG 107607 ||||| | ||||| || ||||||||||| | || || || ||||| ||| | || | Sbjct 520779 GTTTATAGATGCAGATCTTTGTCAAAACCCTCACTGGTAAGACCATCACCCTTGAGGTTG 520720 Query 107608 AGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCG 107667 || | |||| || | | | || || ||||| || ||||||||| | ||| Sbjct 520719 AGCCAAGCGACACAATTGAGAACGTCAAGGCTAAGATCCAGGACAAAGAAGGCATTCCCC 520660 Query 107668 TGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGG 107727 || |||||||| | || | ||| || ||||||||||| || | | ||| || | | Sbjct 520659 CTGACCAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACATTGTCTG 520600 Query 107728 ACTACAACATTCAAAAGGAGTCTACGTTGCA 107758 |||||||||| || || ||||| || ||||| Sbjct 520599 ACTACAACATCCAGAAAGAGTCCACTTTGCA 520569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398460273150898