Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq1581 93.3 3e-14
seq20611 91.5 1e-13
>seq1581
Length=2594311
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/221 (70%), Gaps = 1/221 (0%)
Strand=Plus/Minus
Query 107549 GTTTAAA-ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGG 107607
||||| | ||||| || ||||||||||| | || ||||| ||||| ||| | || |
Sbjct 1373405 GTTTATAGATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCG 1373346
Query 107608 AGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCG 107667
|| | |||| || | | | || || |||||| || ||||||||| | |||
Sbjct 1373345 AGCCAAGCGACACCATTGAGAACGTCAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCC 1373286
Query 107668 TGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGG 107727
|| |||||||| || || | || || ||||||||||| || | ||| || | |
Sbjct 1373285 CTGACCAGCAGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATGGTCGCACACTGTCTG 1373226
Query 107728 ACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|||||||||| || || ||||| || ||||| ||||| ||
Sbjct 1373225 ACTACAACATCCAGAAAGAGTCCACCTTGCATCTGGTGCTG 1373185
>seq20611
Length=922441
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || || |||||||| ||||| ||| | || ||| | |
Sbjct 520543 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCAAGT 520484
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | || || ||||| ||||||||||| | ||| || |||
Sbjct 520483 GACACCATTGAGAACGTCAAGGCTAAGATCCAGGATAAAGAAGGTATTCCCCCTGACCAG 520424
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | || | ||| || ||||||||||| || | ||| || | |||||||||
Sbjct 520423 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGTCGCACATTGTCTGACTACAAC 520364
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|| ||||| ||||| || ||||| ||||||||
Sbjct 520363 ATCCAAAAAGAGTCCACCTTGCATCTGGTGTTG 520331
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/211 (69%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 107549 GTTTAAA-ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGG 107607
||||| | ||||| || ||||||||||| | || || || ||||| ||| | || |
Sbjct 520779 GTTTATAGATGCAGATCTTTGTCAAAACCCTCACTGGTAAGACCATCACCCTTGAGGTTG 520720
Query 107608 AGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCG 107667
|| | |||| || | | | || || ||||| || ||||||||| | |||
Sbjct 520719 AGCCAAGCGACACAATTGAGAACGTCAAGGCTAAGATCCAGGACAAAGAAGGCATTCCCC 520660
Query 107668 TGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGG 107727
|| |||||||| | || | ||| || ||||||||||| || | | ||| || | |
Sbjct 520659 CTGACCAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACATTGTCTG 520600
Query 107728 ACTACAACATTCAAAAGGAGTCTACGTTGCA 107758
|||||||||| || || ||||| || |||||
Sbjct 520599 ACTACAACATCCAGAAAGAGTCCACTTTGCA 520569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398460273150898
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |