Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq13143 102 8e-17
seq1581 86.0 6e-12
>seq13143
Length=1991197
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| | ||||| || | ||| | || ||||| || || ||||||||||| |
Sbjct 1624820 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGAC 1624761
Query 137245 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303
| |||| || | ||||| | || || |||||| |||||||||| ||||| || |||||
Sbjct 1624760 AGCGTGCGTCCA-TCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 1624702
Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363
|||||||| ||||| ||||| ||| | | || | ||||| |||| || ||
Sbjct 1624701 GATGCCTTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAAC 1624642
Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| | || | |||||||| |||| || || ||||| || |||||
Sbjct 1624641 CTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 1624594
Score = 84.2 bits (92), Expect = 2e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| | ||||| || | ||| | || ||||| || || ||||||||||| |
Sbjct 1625611 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGAC 1625552
Query 137245 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303
| |||| || | ||||| | || || |||||| |||||||||| ||||| || |||||
Sbjct 1625551 AGCGTGCGTCCA-TCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 1625493
Query 137304 TATGCCTTCTTTGTC 137318
|||||||| |||||
Sbjct 1625492 GATGCCTTCCTTGTC 1625478
>seq1581
Length=2594311
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
||||| | | ||||| || | ||| | || || ||||| || |||||||| || |
Sbjct 1373171 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 1373230
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| ||||| ||||| || ||||| ||||| ||||||| | ||||| || || ||
Sbjct 1373231 AGTGTGCGACCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGA 1373290
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|||||||||||||| || ||| || | | || | ||||| | || || ||
Sbjct 1373291 ATGCCTTCTTTGTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGACC 1373350
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|||| || | |||||||| || | ||||| || || || |||||
Sbjct 1373351 TCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1373397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488020757162400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |