Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq7795 104 4e-17 seq16091 86.0 1e-11 >seq7795 Length=4523069 Score = 104 bits (114), Expect = 4e-17 Identities = 126/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| ||| ||||||||||||| || ||||| ||| | || | | || ||||| Sbjct 1228857 GATAGCGTCAGCGCTATGGTGGTACTACATCTCTAAGGGGGTGGAGTTTCTGGACACAGT 1228916 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 ||| ||||| | ||||| ||||||||||| || |||||||| ||||| ||||| || | Sbjct 1228917 GTTCTTCATCATGAGGAAGAAGTTTAATCAGGTCAGCTTTCTGCACGTCTATCACCACTG 1228976 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 || ||||||| | | ||| | || || || ||| || | || || ||| Sbjct 1228977 CACAATGTTTATCCTGTGGTGGATCGGCATCAAGTGGGTTCCTGGTGGACAG 1229028 >seq16091 Length=3545666 Score = 86.0 bits (94), Expect = 1e-11 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| ||| |||||||||||| || ||||| ||| | || | | || ||||| Sbjct 2080319 GATAGCGTCAGCGCTATGGTGGTACTGCATCTCTAAGGGGGTGGAGTTTCTGGACACAGT 2080260 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 ||| ||||| | ||||| |||||||| || || ||||| || ||||| ||||| || | Sbjct 2080259 GTTCTTCATCATGAGGAAGAAGTTTAACCAGGTCAGCTTCCTGCACGTCTATCACCACTG 2080200 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 || ||||| | | | ||| | || || || ||| || | || || ||| Sbjct 2080199 CACAATGTTCATCCTGTGGTGGATCGGCATCAAGTGGGTTCCTGGCGGACAG 2080148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902443624019520